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The map label for this gene is yiiR [H]

Identifier: 170026323

GI number: 170026323

Start: 4550497

End: 4550865

Strand: Reverse

Name: yiiR [H]

Synonym: YPK_4116

Alternate gene names: 170026323

Gene position: 4550865-4550497 (Counterclockwise)

Preceding gene: 170026326

Following gene: 170026318

Centisome position: 97.04

GC content: 52.03

Gene sequence:

>369_bases
ATGGGGCTGTGGCTACTGGCAATGCTGGTTATTTTTACGTTGGCGGGGAAGGAGTGGCTCCCGATTCAGTCAGCCTCGTT
TGCGCTTGTTTTCTTACTGTGGCCAACGGCCACCGTCGTCGTCAAGCGGCTACATGATCGTAATAAAGCAGGCTGGTGGG
CATTGTTGGCGGTGCTAGCCTGGATGCTGATGGCTGGAAATTGGCAGATGCTGACGCCTATTTGGCAATGGGGGGTTGGG
CGATTTATCCCTACGCTTATTTTTGTCATGATGTTTATCGACTGCGGTGCTTTTCTTGGGACAGAAGGTGATAACCGCTT
TGGCCGAGAAGCGGTGCCAGTGAAATTTTTCGCTGATAAGGCGAAGTGA

Upstream 100 bases:

>100_bases
CGAAATTATGTTGGGTAAATGGATCTGTTCATCAATGACAATACAGCAGTGGTGTTTCTCATTTAAAGGCCGCATCGGGC
GGCGAGAATTTTGGATCTGG

Downstream 100 bases:

>100_bases
CGTTTTTAGGTTAATGGCCAAATTGAAGTTAATAACTAAATTGAAGTTAATAGCTAAATTGAAGTTAATAACCCAATATT
CGCAGCAAAGAGCAGGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTATVVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVG
RFIPTLIFVMMFIDCGAFLGTEGDNRFGREAVPVKFFADKAK

Sequences:

>Translated_122_residues
MGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTATVVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVG
RFIPTLIFVMMFIDCGAFLGTEGDNRFGREAVPVKFFADKAK
>Mature_121_residues
GLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTATVVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVGR
FIPTLIFVMMFIDCGAFLGTEGDNRFGREAVPVKFFADKAK

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=120, Percent_Identity=60.8333333333333, Blast_Score=156, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 13875; Mature: 13744

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTATVVVKRLHDRNKAGWWALLAVLA
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
WMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGREAVPVKFFADK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
AK
CC
>Mature Secondary Structure 
GLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTATVVVKRLHDRNKAGWWALLAVLA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
WMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGREAVPVKFFADK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
AK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]