Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170026314

Identifier: 170026314

GI number: 170026314

Start: 4539058

End: 4539642

Strand: Reverse

Name: 170026314

Synonym: YPK_4107

Alternate gene names: NA

Gene position: 4539642-4539058 (Counterclockwise)

Preceding gene: 170026315

Following gene: 170026305

Centisome position: 96.81

GC content: 53.16

Gene sequence:

>585_bases
ATGCAAAGAGGCTGCTGTTTTCTCCGTAGTACAACTACCGCTGGAGTGGCTTTGATCGTTGCCATGACGCTATCGGTATC
GGCATGGGCAATTTCAGAACAGGCAAAGTCAGAACAGGCCACGACCGTACCAAATAATGATATCGTCTGTCATGTGGCTC
ACCTCAACGCCCGTTTTGACGATAAAGAGGGGCTATTCGAAGGTGCATCACAAAGCGGTACTTTGCTGATATTACGTAAT
ATTAGCGCTCGAGCCTGCCAGGTTAATGCAATGCCAGTGATCAGTTTCGAAGGCGCAGTTGGCCAGCAGTTGGCCGTCTT
TCGCAAAGTACCGCGTGGGATGCGGCAGGAGCCGGTACTCTCACCCGTCACTGTTGCGGCGGGAGCTGAAGTCGCGGTGC
AATTGCGTTGGGTGGCCAGTGACGCGTTCGATGGGAATAACTGTGTAACACCTGAGAAAGTGGTGGTGACCCTGCTAGGG
GGGACATTGCGTTTACCTTTCGGCCGACAGATGTGTGCGGCATCTGGTGATACTGAATTCTTCAGTCAGGCACCAGTAGG
CCCAGCGACCAATGAGGTGCAATGA

Upstream 100 bases:

>100_bases
ATAAACGTATTATCGTGGATTTATTATTTTCACGGCCCGATACCCACAGTGATTATCTATTTACTGACTTAATTCATTCA
CATCTTGATGAGGTTTTTTG

Downstream 100 bases:

>100_bases
GTATCGGGAGGGGGCAATATTACGCCAGGATCGCAATCACAGTGGATAGGAGAAGAAGGGGAACCTTCTCCTATCTGTGC
ACTAATCCCCGTCAGACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRN
ISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLG
GTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ

Sequences:

>Translated_194_residues
MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRN
ISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLG
GTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ
>Mature_194_residues
MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFDDKEGLFEGASQSGTLLILRN
ISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVLSPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLG
GTLRLPFGRQMCAASGDTEFFSQAPVGPATNEVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20537; Mature: 20537

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFD
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC
DKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVL
CCCCHHCCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCC
SPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEF
CCEEEECCCEEEEEEEEEECCCCCCCCCCCHHHEEEEEECCEEECCCCCHHHHCCCCCHH
FSQAPVGPATNEVQ
HHCCCCCCCCCCCC
>Mature Secondary Structure
MQRGCCFLRSTTTAGVALIVAMTLSVSAWAISEQAKSEQATTVPNNDIVCHVAHLNARFD
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC
DKEGLFEGASQSGTLLILRNISARACQVNAMPVISFEGAVGQQLAVFRKVPRGMRQEPVL
CCCCHHCCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCC
SPVTVAAGAEVAVQLRWVASDAFDGNNCVTPEKVVVTLLGGTLRLPFGRQMCAASGDTEF
CCEEEECCCEEEEEEEEEECCCCCCCCCCCHHHEEEEEECCEEECCCCCHHHHCCCCCHH
FSQAPVGPATNEVQ
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA