| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is ppc [H]
Identifier: 170026298
GI number: 170026298
Start: 4519909
End: 4522545
Strand: Direct
Name: ppc [H]
Synonym: YPK_4091
Alternate gene names: 170026298
Gene position: 4519909-4522545 (Clockwise)
Preceding gene: 170026297
Following gene: 170026299
Centisome position: 96.38
GC content: 52.6
Gene sequence:
>2637_bases ATGAACGAACAATATTCCGCAATGCGAAGTAACGTCAGTATGCTCGGCACACTACTCGGAGACACCATCAAGGAAGCGTT GGGAGAGCACATTCTTGATAGAGTAGAAACCATCCGGAAATTATCCAAATCTTCGCGTGCGGGTAATGAAGCAAGCCGTC AGGAATTACTGACCACACTGCAAAATCTTTCCAACGATGAGCTACTGCCGGTCGCCCGTGCCTTTAGCCAATTCCTTAAT CTGACGAATACGGCAGAGCAATACCACAGTATTTCACCACATGGTGAAGCCGCGAGTAATCCGGAAGCTCTCGCCCAATT ATTTACCCGCTTAAAAGATAAAAAGCTGAGCGATCAAGATATGCGCAGCGCGGTTGACGATTTGTCGATTGAGTTGGTCT TGACTGCCCACCCAACCGAAATTACCCGCCGCACCTTGATCCATAAACTGGTTGAAGTGAATACCTGCCTGAGCCAGTTG GATCACAATGATTTAGCCGATTACGAACGCAACAAGATCATGCGTCGTTTACGGCAGTTAGTTGCACAATCGTGGCATAC CGACGAAATTCGCAAACTGCGTCCCTCGCCCGTTGATGAAGCCAAATGGGGCTTTGCGGTGGTGGAAAACAGCCTGTGGG AAGGCGTCCCTGCATTCCTGCGTGAGTTTAACGAGCAGTTAGAGAACTCCCTTGATTACCGTCTACCCGTGGAAGCGGTA CCTATTCGCTTTACTTCATGGATGGGCGGTGACCGCGATGGTAACCCGAATGTAACGGCTGAAATCACTCGCCATGTGCT GCTACTCAGCCGTTGGAAAGCCACCGATTTATTCCTGCGTGATATTCAGGTGCTGGTGTCTGAACTTTCTATGTCGGAAT GTACCCCGGAGCTGCGTGAATTAGCCGGTGGTGAAGAGGTGCTTGAACCTTATCGCCAACTGATGAAGAACGTTCGTACC CAATTGACCAATACCCAGGCTTATCTGGAAGCGCGTCTGAAAGGCGAGCGCGTATTGCCACCACACGATTTACTGGTCAG TAATGATCAACTGTGGGAACCGCTCTACGCCTGCTATCAATCGCTGAAAGCCTGTGGCATGGAAATCATCGCCAACGGTC AGTTGTTGGATACCCTACGCCGCGTGCGTTGTTTTGGTGTGCCATTGGTGCGCATTGATGTGCGTCAGGAAAGTACCCGT CATACCGATGCTATCGCGGAGCTGACCCGTTATCTGGGCCTTGGTGATTATGAGAGTTGGTCTGAATCAGACAAGCAAGC CTTTTTGGTCCGCGAACTGAACTCTAAGCGCCCACTGGTTCCTCTAAAATGGGAACCTAGCGCCGAGACACAAGAAGTGC TGGAAACCTGTCGGGTGATTGCTGAAGCACCGCAAGGTTCTATCGCTGCTTACGTTATCTCTATGGCGAAAGTGCCGTCA GACGTGCTGGCCGTGCATTTGTTACTGAAAGAAGCGGGTTGCCCATTCACTCTACCTGTCGCCCCGCTATTCGAGACCCT CGATGACTTGAACAACGCTGACGATGTCATGACCCAGTTGCTGGGTATCGATTGGTATCGTGGCCTGATCCAAGGCAAGC AGATGGTGATGATTGGCTATTCTGACTCGGCAAAAGACGCCGGTGTTATGGCGGCCTCTTGGGCACAATACCGGGCGCAG GATGCACTGATTAAAACCTGTGAGAAAGCCGGGATTACGCTGACATTGTTCCATGGCCGTGGGGGGTCTATTGGTCGTGG CGGTGCGCCAGCCCATGCGGCATTGCTCTCTCAGCCTCCGGGCAGTCTGAAAGGCGGCTTACGGGTTACCGAACAAGGCG AGATGATTCGCTTTAAGTTTGGGTTACCGGAAGTCACCATCAGCAGCCTGGCGCTGTACGCAGGTGCAATTCTGGAAGCC AATCTGTTACCGCCACCAGAGCCGAAGAAAGAGTGGATTGAAGTGATGGATCTGCTGTCAGACGCCTCTTGCGACATGTA TCGCAGCTACGTTCGTGAAAATCCAGAGTTCGTCCGTTACTTCCGTGCTGCGACACCGGAATTGGAACTTGGCAAGCTGC CTCTGGGTTCCCGCCCAGCCAAACGCCGCCCGGACGGTGGAGTGGAAAGTCTGCGGGCGATCCCATGGATTTTCGCCTGG ACACAAAACCGTCTGATGCTCCCTGCCTGGTTGGGTGCCGGTGCGGGTTTGCAGAGAGCGATCGATGCAGGTAAGCGAGA TGTACTCGCCACCATGTGCCGTGACTGGCCGTTCTTCTCGACCCGCATTGGTATGCTGGAGATGGTCTTCGCCAAAGCCG ATTTGTGGCTGGCAGAATATTATGATCAGCGTTTAGTGGATAAATCGCTATGGCCGTTAGGTCAGCAGTTACGTGACCAA CTGGCAGCCGATATTAAAGTGGTGTTGGCTATCGCCAACGATGACCATTTGATGGCTGACTTGCCATGGATTGCCGAATC CATCGCGTTGCGTAACGTGTACACCGATCCATTAAACGTACTGCAAGCCGAGCTATTGCACCGTTCACGCCAACAAGAAC ACCCTGATGCCTGTGTTGAACAAGCGTTGATGGTGACCATTGCCGGTGTGGCTGCGGGGATGCGGAATACCGGTTAG
Upstream 100 bases:
>100_bases ATTTTAAGTAAGGTCAACGACAGGTAAGTGATTCGGGTGAGTGAACATAGCTAGCAATCCTGCGGCTTCAAACACGAAGG ATAAATGGGTCAGAGGTCAT
Downstream 100 bases:
>100_bases GATTTAGGGGGGAAGAGATTCCCCCGGTTATCTTTTGGTATTTTTGGGGTGAGGGTGATTTGAGCCGGTGAGCGGGTTCG GTTGTTATGGCTTTACGTCT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTLQNLSNDELLPVARAFSQFLN LTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQDMRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQL DHNDLADYERNKIMRRLRQLVAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAV PIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRELAGGEEVLEPYRQLMKNVRT QLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQSLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTR HTDAIAELTRYLGLGDYESWSESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPS DVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQ DALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEA NLLPPPEPKKEWIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAW TQNRLMLPAWLGAGAGLQRAIDAGKRDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQ LAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG
Sequences:
>Translated_878_residues MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTLQNLSNDELLPVARAFSQFLN LTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQDMRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQL DHNDLADYERNKIMRRLRQLVAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAV PIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRELAGGEEVLEPYRQLMKNVRT QLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQSLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTR HTDAIAELTRYLGLGDYESWSESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPS DVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQ DALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEA NLLPPPEPKKEWIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAW TQNRLMLPAWLGAGAGLQRAIDAGKRDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQ LAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG >Mature_878_residues MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTLQNLSNDELLPVARAFSQFLN LTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQDMRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQL DHNDLADYERNKIMRRLRQLVAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAV PIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRELAGGEEVLEPYRQLMKNVRT QLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQSLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTR HTDAIAELTRYLGLGDYESWSESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPS DVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQ DALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEA NLLPPPEPKKEWIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAW TQNRLMLPAWLGAGAGLQRAIDAGKRDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQ LAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=883, Percent_Identity=81.9932049830125, Blast_Score=1478, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 98353; Mature: 98353
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QNLSNDELLPVARAFSQFLNLTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQD HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH MRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQLDHNDLADYERNKIMRRLRQL HHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAV HHHCCCCHHHHHCCCCCCCCHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEE PIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRE CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHH LAGGEEVLEPYRQLMKNVRTQLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQ HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHH SLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTRHTDAIAELTRYLGLGDYESW HHHHCCHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC SESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPS CCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH DVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGY HHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC SDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCCC GSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKEWIEVMDLLS CCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC DASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAW CCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEE TQNRLMLPAWLGAGAGLQRAIDAGKRDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEY CCCCEEEHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNV HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCHHHH LQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QNLSNDELLPVARAFSQFLNLTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQD HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH MRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQLDHNDLADYERNKIMRRLRQL HHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAV HHHCCCCHHHHHCCCCCCCCHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEE PIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRE CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHH LAGGEEVLEPYRQLMKNVRTQLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQ HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHH SLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTRHTDAIAELTRYLGLGDYESW HHHHCCHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC SESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPS CCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH DVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGY HHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC SDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCCC GSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKEWIEVMDLLS CCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC DASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAW CCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEE TQNRLMLPAWLGAGAGLQRAIDAGKRDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEY CCCCEEEHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNV HHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEECCHHHHHHHHHHHHCCCHHHH LQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA