| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is wzyE [H]
Identifier: 170026233
GI number: 170026233
Start: 4436576
End: 4437940
Strand: Reverse
Name: wzyE [H]
Synonym: YPK_4023
Alternate gene names: 170026233
Gene position: 4437940-4436576 (Counterclockwise)
Preceding gene: 170026234
Following gene: 170026232
Centisome position: 94.64
GC content: 48.42
Gene sequence:
>1365_bases ATGACGCTGGGGCAATTTGGCGGTCTATTTTGTATTTATTTGATAGCAGTCATTTTTATTCTGACACTAACCTATCAGGA ATTTCGGCGGGTTAAGTTTAACTTTAACGTTTTGTTTTCAATGCTTTATCTGTTGACCTTCTATTTTGGTTTCCCACTGA CTTGTATGCTGGTGTTTCAGTTTGGGGTGGCGGTGGTGCCGGTTGAGTATTTGTTGTACGCCATGCTGTCTGCTACGGCC TTTTATGGCATTTACTATGTCACCTATAAAACACGGTTACGTCAGCCTCGTAGCCAGCCGCGCACGCCAATATTCACCAT GAACCGGGTAGAAACTAATCTGACCTGGGTGCTGCTGGCACTGGTCGCGGTAGGGACCGTCGGCATCTTCTTTATGCAAA ACGGTTTCTTGCTGTTTAAGCTGGATTCCTACAGCAAAATATTCTCCAGTGATGTCTCTGGTGTCGCCCTGAAGCGTTTT TTCTACTTCTTTATCCCGGCAATGCTGGTGGTTTATTTCCTCAAGCAGGATCGGCGGGCCTGGTTCTTCTTCCTTGCCAG CACGGTGGCGTTTGGCATTCTAACTTATGTCATCGTTGGCGGGACGCGTGCCAATATCATTATCGCGTTCTCATTGTTCC TGTTTATCGGTATCGTCCGTGGATGGATAACCCTGTGGATGCTAGCGGCGGCAGGTGTCTTCGGGATTGTCGGTATGTTC TGGCTGGCCCTTAAACGTTATGGCCTGGATGTGAACGGTGCAGAGGCATTTTACACCTTCCTCTATTTGACGCGGGACAC CTTCTCGCCCTGGGAAAACCTCGGGTTATTGCTACAGAACTACGACAAAATAGATTTCCAGGGGCTGGCACCGATTGTCC GTGATTTTTATGTCTTTATTCCAAGCGCGCTGTGGCCAGAACGCCCGGATTTGGTACTGAATACCGCCAATTACTTTACC TGGGACGTTTTGGACAATCACTCTGGGCTGGCTATCTCGCCAACGCTGATTGGTTCTCTGGTGGTCATGGGGGGGGTATT GTTTATCCCGCTGGGGGCCATTGTTGTGGGGCTTATCATCAAATGGTTCGATTGGTTGTATGAACAAGGCAAGGCCGAGA GTAATCGCTATAAAGCGGCGATCCTGCAAAGCTTCTGTTTTGGGGCGGTGTTTAATATCATTGTCTTGGCACGTGAAGGG CTGGATTCCTTTGTCTCACGAGTGGTATTTTTCTGCGTTATCTTTGGTGCCTGTCTGGTACTGGCAAAATTGTTGTACTG GTTGTTCGATACGGCGGGCTTGATAAAGCGTCAGGGGATTAAATCCAACCGATTATCAACGCCTAACGCGGGCAATCAAC TGTAA
Upstream 100 bases:
>100_bases GTCAACTGGCAGGGTTAGATAAACAAGCGATCGCTTTCTTCAATCCAAATTATATTGAGGGCTGGAAGCAAGCGTTGGCT CTGGCAGCGGGGGAACACCC
Downstream 100 bases:
>100_bases GGATTGTAATGGAACCCAATACTGTCATTCCAAAATATAATGTCCGTGGCTTTGAAATCTGGGGTTTTCGTGACATGGCT CAGGTGCTGGATCATCTACT
Product: putative common antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQFGVAVVPVEYLLYAMLSATA FYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLALVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRF FYFFIPAMLVVYFLKQDRRAWFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFT WDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLIIKWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREG LDSFVSRVVFFCVIFGACLVLAKLLYWLFDTAGLIKRQGIKSNRLSTPNAGNQL
Sequences:
>Translated_454_residues MTLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQFGVAVVPVEYLLYAMLSATA FYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLALVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRF FYFFIPAMLVVYFLKQDRRAWFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFT WDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLIIKWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREG LDSFVSRVVFFCVIFGACLVLAKLLYWLFDTAGLIKRQGIKSNRLSTPNAGNQL >Mature_453_residues TLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQFGVAVVPVEYLLYAMLSATAF YGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLALVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRFF YFFIPAMLVVYFLKQDRRAWFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMFW LALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFTW DVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLIIKWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREGL DSFVSRVVFFCVIFGACLVLAKLLYWLFDTAGLIKRQGIKSNRLSTPNAGNQL
Specific function: Could be involved in ECA polysaccharide chain elongation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the wzyE family [H]
Homologues:
Organism=Escherichia coli, GI2367288, Length=445, Percent_Identity=77.9775280898876, Blast_Score=665, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010691 [H]
Pfam domain/function: PF06899 WzyE [H]
EC number: NA
Molecular weight: Translated: 51654; Mature: 51523
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVAVVPVEYLLYAMLSATAFYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHH LVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRFFYFFIPAMLVVYFLKQDRRA HHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH WFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFI HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH PSALWPERPDLVLNTANYFTWDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLII CHHCCCCCCCEEEECCCEEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREGLDSFVSRVVFFCVIFGACLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKLLYWLFDTAGLIKRQGIKSNRLSTPNAGNQL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVAVVPVEYLLYAMLSATAFYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHH LVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRFFYFFIPAMLVVYFLKQDRRA HHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH WFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFI HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH PSALWPERPDLVLNTANYFTWDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLII CHHCCCCCCCEEEECCCEEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREGLDSFVSRVVFFCVIFGACLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKLLYWLFDTAGLIKRQGIKSNRLSTPNAGNQL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA