Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170026180

Identifier: 170026180

GI number: 170026180

Start: 4379175

End: 4379636

Strand: Reverse

Name: 170026180

Synonym: YPK_3969

Alternate gene names: NA

Gene position: 4379636-4379175 (Counterclockwise)

Preceding gene: 170026181

Following gene: 170026173

Centisome position: 93.39

GC content: 35.71

Gene sequence:

>462_bases
ATGATTGATGGCATAAGTAATAAAATGGACTTACAAGGATTATCTGCAGTTCGTTCCTTCGCTTTTTTGACAGCAGACTT
AATGCTAAATATTACTAATAAAAATGGAGATAATCACGAATATAAAGTGACCAGTTCCCATGTGAATAACGATAAATTAC
AAGGCCCAAAAGGAATTTTAAAAGCCACAAAAAATCACGCAGAACTCAAGAATGAAACTATTGCTTCTGGCGAAAAAAAG
ACGATTAGCTTTGACAAATTGCACGTTCGAGAAATACCTGATAGAGAGCAAGCTAGCTATATCGACAATCTCAGCCTTAA
CCGTAATATTTACTTAGATACCAGTGCTGATCGCGAATGTCGTATTCCCACCCAGGTTCTTAGCCCTGATCAAAACGTAG
ATTCTGGTACCAAAAAACCATTTTGGATCAGTAAATACCTTTGTATTACTACGTTATATTAA

Upstream 100 bases:

>100_bases
TTCCAAAAGGTAGCTTATCGATTCAATATAAAGCCTGATGCCACTCTCGTCTGTATAGGCTTAGTATCTCTCCTTCACTG
CACTTTAAAAAGGATAGGTT

Downstream 100 bases:

>100_bases
CTCTATTTATACCCATTATATTTCGAGTTGCCTATGCGTTGATTGCTCTGTTGCAACTCGAATTATTGAGTGTTCAGCTT
ATTGATAATCTAACGATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELKNETIASGEKK
TISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADRECRIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY

Sequences:

>Translated_153_residues
MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELKNETIASGEKK
TISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADRECRIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY
>Mature_153_residues
MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGILKATKNHAELKNETIASGEKK
TISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADRECRIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17246; Mature: 17246

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGIL
CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH
KATKNHAELKNETIASGEKKTISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADREC
HHCCCHHHHCCHHHCCCCCCEEEECEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCC
RIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY
CCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MIDGISNKMDLQGLSAVRSFAFLTADLMLNITNKNGDNHEYKVTSSHVNNDKLQGPKGIL
CCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH
KATKNHAELKNETIASGEKKTISFDKLHVREIPDREQASYIDNLSLNRNIYLDTSADREC
HHCCCHHHHCCHHHCCCCCCEEEECEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCCCC
RIPTQVLSPDQNVDSGTKKPFWISKYLCITTLY
CCCHHHCCCCCCCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA