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The map label for this gene is rfbV [H]

Identifier: 170025404

GI number: 170025404

Start: 3485243

End: 3486205

Strand: Reverse

Name: rfbV [H]

Synonym: YPK_3187

Alternate gene names: 170025404

Gene position: 3486205-3485243 (Counterclockwise)

Preceding gene: 170025405

Following gene: 170025403

Centisome position: 74.34

GC content: 26.9

Gene sequence:

>963_bases
ATGATTAAAATGGTTAGTATTTGTATTCCTAGCTTGAACAGAAGTGTTTATCTATTAAAAACATTGAAATCTATATATGA
ACAAGAATCACATAATTTATGTTTTGAAGTATGTATTTCTAATAATGCATCAACAGATGACTATTCAATAATCGAGGAAT
ATGTAGAAAAGATAAAAGAATCACATGGGAATGTAATTTATATTTCTCATGAAAAACAAATTCCAATAGATGAGCATCAT
CATTATGTTACTAATATGGCAAGAGGCGATTATATATATTTCCTCGGTGATGATGATTGCTTTTATCCTGATGCTTTTAA
TAAGATATCGAAACTTCTAGAAGAAAATGATTTAGATTTGGCCATTTTCAATGGGGCTAAAATTGATGAGAATAATAAGT
TTATTGGCCGTGTGTTATCTCTGCCTGATAAAAAATATGAAGATCTAGAGTCGGCGTTTTTGGATCTTAAAGATAAGTCA
CCTTTTGGTGCTATTCTTGTTAAAAAAGAATATTTGTCTAACAATTATTTTAAATTATTATATGGAACATCTCATGCATA
TTGTTGTTTTTGGTTGAATATGATGAATCATAAAGAATGGTTTTTTACAATTATTATTCCGGATTTTAGGTGTGTGCAGT
TAAGAAGACTAAAAAAGAATTATAGTAGAGTTGATGTTTTTTATCATGAGATTGCTTTTTATATAGAAACATTTTATGCG
AATGTTAACTCTGATAAAGCTAAAGAAATCATCCGAATATTTAGAGAAGAACACAATAAAAAGATATATAGTATACCATT
TATGGCTTATATGCTTTATCACGGAACTAAACTCTCTCAATTAAAAAACTCTTCACCAGGAAAACCATTTTTCTTTTTTA
AAAAGTTAATTTCTAGAATTCTAGCAATTAATCCCATATATGATTTTGCTCACTCTTTTTATTTTAAAATTATAAAAAAA
TAA

Upstream 100 bases:

>100_bases
TGTCGAGTTAATTATTATTAGGATTGCTGGTAAATATATTATTACTTACATCAAATGTTATTGATGCAAGTATAAACTTG
TGATGATAATGGGAATGATA

Downstream 100 bases:

>100_bases
TGTATTATTAATACCAGTCTTTAATGAGTTGAGTGCTTCTGGTTGTGTTTTTTGTAAAATTAATAAAAATCATTTTTAAA
AAATTATTTTTATTTTAATA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIKMVSICIPSLNRSVYLLKTLKSIYEQESHNLCFEVCISNNASTDDYSIIEEYVEKIKESHGNVIYISHEKQIPIDEHH
HYVTNMARGDYIYFLGDDDCFYPDAFNKISKLLEENDLDLAIFNGAKIDENNKFIGRVLSLPDKKYEDLESAFLDLKDKS
PFGAILVKKEYLSNNYFKLLYGTSHAYCCFWLNMMNHKEWFFTIIIPDFRCVQLRRLKKNYSRVDVFYHEIAFYIETFYA
NVNSDKAKEIIRIFREEHNKKIYSIPFMAYMLYHGTKLSQLKNSSPGKPFFFFKKLISRILAINPIYDFAHSFYFKIIKK

Sequences:

>Translated_320_residues
MIKMVSICIPSLNRSVYLLKTLKSIYEQESHNLCFEVCISNNASTDDYSIIEEYVEKIKESHGNVIYISHEKQIPIDEHH
HYVTNMARGDYIYFLGDDDCFYPDAFNKISKLLEENDLDLAIFNGAKIDENNKFIGRVLSLPDKKYEDLESAFLDLKDKS
PFGAILVKKEYLSNNYFKLLYGTSHAYCCFWLNMMNHKEWFFTIIIPDFRCVQLRRLKKNYSRVDVFYHEIAFYIETFYA
NVNSDKAKEIIRIFREEHNKKIYSIPFMAYMLYHGTKLSQLKNSSPGKPFFFFKKLISRILAINPIYDFAHSFYFKIIKK
>Mature_320_residues
MIKMVSICIPSLNRSVYLLKTLKSIYEQESHNLCFEVCISNNASTDDYSIIEEYVEKIKESHGNVIYISHEKQIPIDEHH
HYVTNMARGDYIYFLGDDDCFYPDAFNKISKLLEENDLDLAIFNGAKIDENNKFIGRVLSLPDKKYEDLESAFLDLKDKS
PFGAILVKKEYLSNNYFKLLYGTSHAYCCFWLNMMNHKEWFFTIIIPDFRCVQLRRLKKNYSRVDVFYHEIAFYIETFYA
NVNSDKAKEIIRIFREEHNKKIYSIPFMAYMLYHGTKLSQLKNSSPGKPFFFFKKLISRILAINPIYDFAHSFYFKIIKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 37949; Mature: 37949

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKMVSICIPSLNRSVYLLKTLKSIYEQESHNLCFEVCISNNASTDDYSIIEEYVEKIKE
CEEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
SHGNVIYISHEKQIPIDEHHHYVTNMARGDYIYFLGDDDCFYPDAFNKISKLLEENDLDL
CCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCE
AIFNGAKIDENNKFIGRVLSLPDKKYEDLESAFLDLKDKSPFGAILVKKEYLSNNYFKLL
EEECCCEECCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCEEEE
YGTSHAYCCFWLNMMNHKEWFFTIIIPDFRCVQLRRLKKNYSRVDVFYHEIAFYIETFYA
ECCCCEEHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVNSDKAKEIIRIFREEHNKKIYSIPFMAYMLYHGTKLSQLKNSSPGKPFFFFKKLISRI
CCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH
LAINPIYDFAHSFYFKIIKK
HHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKMVSICIPSLNRSVYLLKTLKSIYEQESHNLCFEVCISNNASTDDYSIIEEYVEKIKE
CEEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
SHGNVIYISHEKQIPIDEHHHYVTNMARGDYIYFLGDDDCFYPDAFNKISKLLEENDLDL
CCCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCE
AIFNGAKIDENNKFIGRVLSLPDKKYEDLESAFLDLKDKSPFGAILVKKEYLSNNYFKLL
EEECCCEECCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCEEEE
YGTSHAYCCFWLNMMNHKEWFFTIIIPDFRCVQLRRLKKNYSRVDVFYHEIAFYIETFYA
ECCCCEEHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVNSDKAKEIIRIFREEHNKKIYSIPFMAYMLYHGTKLSQLKNSSPGKPFFFFKKLISRI
CCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHH
LAINPIYDFAHSFYFKIIKK
HHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]