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The map label for this gene is ykfA [H]

Identifier: 170025356

GI number: 170025356

Start: 3428872

End: 3429759

Strand: Reverse

Name: ykfA [H]

Synonym: YPK_3137

Alternate gene names: 170025356

Gene position: 3429759-3428872 (Counterclockwise)

Preceding gene: 170025357

Following gene: 170025355

Centisome position: 73.14

GC content: 54.95

Gene sequence:

>888_bases
ATGAAACAACCTTCAGGCTATACCCTGATTCGCCGCCATCTGCGGCGTTACCCGCGTTCATTGCGACAGCATCTTCTCAA
TGAGCTCAACCGGTTGGTCACCTATGAGCCGGTTATCGGCATCATGGGTAAAACCGGCGTTGGTAAAAGCTCACTCTGTA
ACGCTCTGTTTCGCAGCGAGTCCTGTGCTGTCAATGCCGTGAAGGCCTGCACTCGCCAGCCACAGCGCGTCCGGCTCCGC
TTTGGAAGCCATTATCTGACACTTATCGACTTACCCGGTGTGGGAGAGAACCAGCAGCGCGACGGTGAATACCGGGAACT
GTATCGGGAGCAATTACCTGAGCTCGATATGGTGCTGTGGGTGCTTAAAGCCGATGATCGTGCGTTTTCGGTAGAAGAGC
AATTTCACCAGGCAGTGTTTGAGCAGTACAACGGGGTGTTACCGCCTGTACTGTGGATTCTCAATCAGGTTGATAAAACC
GAACCTTCTGAACAGTGGAACTGGTCGTCAGCGCAGCCATCTGCCAAACAGGCCGAGCATATTACCCTGAAGCAGCAGGC
GGTGGCTCGCCAAATGAGGATAGATGAGCTCGATATCCTTTCGGTCTCTGTCCGTGGACGTTATCACCTGTCTCGCCTGG
TAGAGGCTATGATAACCCGGCTCCCAAAGCAGGCCCGTAGCCCATTGGTGCCGCATCTGCAAACTGAGTATCGCACCACC
GGAGTCATCAGCAGCGCCCGAAGCAGCTTCGGGGAAAGTGTGGTTGAGGTCATTAATCGGGTGATCGATTTGACACCTCT
GCCGCAGGTTGCCCGGCGAGCCTTACAGGCTGTCACCCACTCTGTTACGCGGGCGGCGGGTACCGTTTGGTCCTTCTTTT
TCGGATAA

Upstream 100 bases:

>100_bases
TCTAATTAATTTTCAGCCATATATCATCTAACTGAGTAAAACAGTTATTTCTTCCAACAGGCCATCCACTTCGGGTGGCC
TTTTTTATTCTGAGGTCAGT

Downstream 100 bases:

>100_bases
CCCATTGCCGCGGCCTCATCGATAAAATTATGAGACGTGTCGATAAACCATGTAGCTGCATCACGATCGATTTTGTCGAT
CGAACCGATCGGACTTATTC

Product: HSR1-like GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKQPSGYTLIRRHLRRYPRSLRQHLLNELNRLVTYEPVIGIMGKTGVGKSSLCNALFRSESCAVNAVKACTRQPQRVRLR
FGSHYLTLIDLPGVGENQQRDGEYRELYREQLPELDMVLWVLKADDRAFSVEEQFHQAVFEQYNGVLPPVLWILNQVDKT
EPSEQWNWSSAQPSAKQAEHITLKQQAVARQMRIDELDILSVSVRGRYHLSRLVEAMITRLPKQARSPLVPHLQTEYRTT
GVISSARSSFGESVVEVINRVIDLTPLPQVARRALQAVTHSVTRAAGTVWSFFFG

Sequences:

>Translated_295_residues
MKQPSGYTLIRRHLRRYPRSLRQHLLNELNRLVTYEPVIGIMGKTGVGKSSLCNALFRSESCAVNAVKACTRQPQRVRLR
FGSHYLTLIDLPGVGENQQRDGEYRELYREQLPELDMVLWVLKADDRAFSVEEQFHQAVFEQYNGVLPPVLWILNQVDKT
EPSEQWNWSSAQPSAKQAEHITLKQQAVARQMRIDELDILSVSVRGRYHLSRLVEAMITRLPKQARSPLVPHLQTEYRTT
GVISSARSSFGESVVEVINRVIDLTPLPQVARRALQAVTHSVTRAAGTVWSFFFG
>Mature_295_residues
MKQPSGYTLIRRHLRRYPRSLRQHLLNELNRLVTYEPVIGIMGKTGVGKSSLCNALFRSESCAVNAVKACTRQPQRVRLR
FGSHYLTLIDLPGVGENQQRDGEYRELYREQLPELDMVLWVLKADDRAFSVEEQFHQAVFEQYNGVLPPVLWILNQVDKT
EPSEQWNWSSAQPSAKQAEHITLKQQAVARQMRIDELDILSVSVRGRYHLSRLVEAMITRLPKQARSPLVPHLQTEYRTT
GVISSARSSFGESVVEVINRVIDLTPLPQVARRALQAVTHSVTRAAGTVWSFFFG

Specific function: Unknown

COG id: COG3596

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfjP and yeeP [H]

Homologues:

Organism=Escherichia coli, GI87081706, Length=295, Percent_Identity=44.4067796610169, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI48994902, Length=286, Percent_Identity=43.006993006993, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 33703; Mature: 33703

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPSGYTLIRRHLRRYPRSLRQHLLNELNRLVTYEPVIGIMGKTGVGKSSLCNALFRSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
SCAVNAVKACTRQPQRVRLRFGSHYLTLIDLPGVGENQQRDGEYRELYREQLPELDMVLW
CHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHH
VLKADDRAFSVEEQFHQAVFEQYNGVLPPVLWILNQVDKTEPSEQWNWSSAQPSAKQAEH
HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
ITLKQQAVARQMRIDELDILSVSVRGRYHLSRLVEAMITRLPKQARSPLVPHLQTEYRTT
HHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHH
GVISSARSSFGESVVEVINRVIDLTPLPQVARRALQAVTHSVTRAAGTVWSFFFG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQPSGYTLIRRHLRRYPRSLRQHLLNELNRLVTYEPVIGIMGKTGVGKSSLCNALFRSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
SCAVNAVKACTRQPQRVRLRFGSHYLTLIDLPGVGENQQRDGEYRELYREQLPELDMVLW
CHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHH
VLKADDRAFSVEEQFHQAVFEQYNGVLPPVLWILNQVDKTEPSEQWNWSSAQPSAKQAEH
HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
ITLKQQAVARQMRIDELDILSVSVRGRYHLSRLVEAMITRLPKQARSPLVPHLQTEYRTT
HHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHH
GVISSARSSFGESVVEVINRVIDLTPLPQVARRALQAVTHSVTRAAGTVWSFFFG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]