| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025355
Identifier: 170025355
GI number: 170025355
Start: 3427907
End: 3428371
Strand: Reverse
Name: 170025355
Synonym: YPK_3136
Alternate gene names: NA
Gene position: 3428371-3427907 (Counterclockwise)
Preceding gene: 170025356
Following gene: 170025354
Centisome position: 73.11
GC content: 54.62
Gene sequence:
>465_bases ATGAAAACGAAGTTATTACTCTCCACCTTATTCATCTCACTACTGACACCTGCTGTGTCCCAGGCTTTTGGTAATCGCGA TGCCTGGGTCAGCGGCTATGCGCAGGGAACAGCGGAATACACCATTCTTGGTAAGGGACAGTCCCAGCTGTATCTCGCCT GCGACAGTAACGGCGACAAACCTGAACTCCTTATTTTCACCGATGGCTCCGGGCGGCAGGTCAGCACGGATAATCATCAG CGGATCATGGTGACAATTGACCAGGAAGATGCCGCCGACGTTAGCGAGACGGCAAGTCACGTAGGCTCGGGTAATTTTAC CTGGATGTGGGAGAAGCTACGCACAGGCAAGCGTGTCACCGTCTCCGGTGATGGCGTGAGCCCGGTGACATTTACCCTGG CGGGAGCGGATAAGGCTTTGCCTGAGTATGCCCGCTCAGCGTGTATACCTGAGTTTTCCCGCTGA
Upstream 100 bases:
>100_bases AGCTACCCGTTGGTACATCACCCTCATTATCTTTATGGCCTGCCTGTTTTTTATCATCACCAGCCTCGGTGACATGGCAG GCTTCTGAAAGGAAAATACG
Downstream 100 bases:
>100_bases TATTGAAGAAAGGATGAATAATGAAAAGTACGTTAATCGCTGCATTTTTAGGTCTGTTTTCGCTTTCAGCGATGGCTGCA GAGGCTCCGTTTAAAGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKTKLLLSTLFISLLTPAVSQAFGNRDAWVSGYAQGTAEYTILGKGQSQLYLACDSNGDKPELLIFTDGSGRQVSTDNHQ RIMVTIDQEDAADVSETASHVGSGNFTWMWEKLRTGKRVTVSGDGVSPVTFTLAGADKALPEYARSACIPEFSR
Sequences:
>Translated_154_residues MKTKLLLSTLFISLLTPAVSQAFGNRDAWVSGYAQGTAEYTILGKGQSQLYLACDSNGDKPELLIFTDGSGRQVSTDNHQ RIMVTIDQEDAADVSETASHVGSGNFTWMWEKLRTGKRVTVSGDGVSPVTFTLAGADKALPEYARSACIPEFSR >Mature_154_residues MKTKLLLSTLFISLLTPAVSQAFGNRDAWVSGYAQGTAEYTILGKGQSQLYLACDSNGDKPELLIFTDGSGRQVSTDNHQ RIMVTIDQEDAADVSETASHVGSGNFTWMWEKLRTGKRVTVSGDGVSPVTFTLAGADKALPEYARSACIPEFSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16641; Mature: 16641
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKLLLSTLFISLLTPAVSQAFGNRDAWVSGYAQGTAEYTILGKGQSQLYLACDSNGDK CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCCC PELLIFTDGSGRQVSTDNHQRIMVTIDQEDAADVSETASHVGSGNFTWMWEKLRTGKRVT CEEEEEECCCCCEECCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEHHHCCCCEEE VSGDGVSPVTFTLAGADKALPEYARSACIPEFSR EECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTKLLLSTLFISLLTPAVSQAFGNRDAWVSGYAQGTAEYTILGKGQSQLYLACDSNGDK CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCCC PELLIFTDGSGRQVSTDNHQRIMVTIDQEDAADVSETASHVGSGNFTWMWEKLRTGKRVT CEEEEEECCCCCEECCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEHHHCCCCEEE VSGDGVSPVTFTLAGADKALPEYARSACIPEFSR EECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA