| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025348
Identifier: 170025348
GI number: 170025348
Start: 3423793
End: 3424641
Strand: Reverse
Name: 170025348
Synonym: YPK_3129
Alternate gene names: NA
Gene position: 3424641-3423793 (Counterclockwise)
Preceding gene: 170025349
Following gene: 170025345
Centisome position: 73.03
GC content: 46.76
Gene sequence:
>849_bases ATGTCTGAGATACAAGTCAATAACGACTCCGACGTAATAACCGGTCATACCGAAATCATCAGTTCCACCAGCATTGAACG TATCGTGACAGGCCGCAATGCGGCACTGCTACAGATTGAAGAACTCATCCAGCAACTTGCCGACATTTCGACGCTGACCA GTAGTATCGGTGGAAAAACGGCCCGTGACTGGGCGATGCGTCAGGACTTTCGTTGTGGCTGCTGGCTCATGGAAAACGTG AAAACTGCAATGAGTACCATTACCTGTAATCTTGATCGCAGCATCTGGCGTGATCTGATGAAAAAATCAGGGATGATCTC GTTGATGGACGCTCAGGCGCGTAAGCAATGGGATAATAATCTCGAGGGTGACGATATTCCTGAGATCAGCGAAGCTAACA TTCTTAGCACCTTTGAGCAATTGCATCACAGTAAAGCTGATGTGTTTGAACGGGGCATCATTAATGTGTTCAAAGGTTTG TCATGGGATTACAAAACGAACTCCCCTTGCCAGTTCGGCAAAAAGATTATTGTAAATGGCCTAGTGGATCACAACCGCTG GGGATTTAAGCTCAACTGGGGATGGCGTCGGGAACAACTGGCTGACCTGGAACGTATGTTGTTTTTACTCGATGGCAAAC CGATTCCCGACAACCGTGGTGATATCTCTAACCGATTGATGGAACATATTCGGGATAACCCGGCTAAGGATGTTTACGAG GATGAGTTCTTCAGTATTCGTTACTTTCAGAAGGGTACTGCGCATCTCACCTTCAAGCGCCCCGAGTTAGTTGAGAAGAT GAACGACATCATTTCTAAGTATTATCCTAGGATGTTGGCGTCCAGATAG
Upstream 100 bases:
>100_bases ACAATGCGAGCAACGATATCTTCATTCAAAACACATAACCTGCATAAGCGCCAGCCCTCATTCGTCTGGCGATTATGCAT TGATATAAAGGAAATAATCC
Downstream 100 bases:
>100_bases TTAGCCTTTACAATAGCTGCTGCGTGAGGTGTTAACCCGCTAAGCAGATTCAATCAGCAAAGCCTCGCAAAACAATGTGT TGGTACAATCGTTGGTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSEIQVNNDSDVITGHTEIISSTSIERIVTGRNAALLQIEELIQQLADISTLTSSIGGKTARDWAMRQDFRCGCWLMENV KTAMSTITCNLDRSIWRDLMKKSGMISLMDAQARKQWDNNLEGDDIPEISEANILSTFEQLHHSKADVFERGIINVFKGL SWDYKTNSPCQFGKKIIVNGLVDHNRWGFKLNWGWRREQLADLERMLFLLDGKPIPDNRGDISNRLMEHIRDNPAKDVYE DEFFSIRYFQKGTAHLTFKRPELVEKMNDIISKYYPRMLASR
Sequences:
>Translated_282_residues MSEIQVNNDSDVITGHTEIISSTSIERIVTGRNAALLQIEELIQQLADISTLTSSIGGKTARDWAMRQDFRCGCWLMENV KTAMSTITCNLDRSIWRDLMKKSGMISLMDAQARKQWDNNLEGDDIPEISEANILSTFEQLHHSKADVFERGIINVFKGL SWDYKTNSPCQFGKKIIVNGLVDHNRWGFKLNWGWRREQLADLERMLFLLDGKPIPDNRGDISNRLMEHIRDNPAKDVYE DEFFSIRYFQKGTAHLTFKRPELVEKMNDIISKYYPRMLASR >Mature_281_residues SEIQVNNDSDVITGHTEIISSTSIERIVTGRNAALLQIEELIQQLADISTLTSSIGGKTARDWAMRQDFRCGCWLMENVK TAMSTITCNLDRSIWRDLMKKSGMISLMDAQARKQWDNNLEGDDIPEISEANILSTFEQLHHSKADVFERGIINVFKGLS WDYKTNSPCQFGKKIIVNGLVDHNRWGFKLNWGWRREQLADLERMLFLLDGKPIPDNRGDISNRLMEHIRDNPAKDVYED EFFSIRYFQKGTAHLTFKRPELVEKMNDIISKYYPRMLASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32611; Mature: 32479
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIQVNNDSDVITGHTEIISSTSIERIVTGRNAALLQIEELIQQLADISTLTSSIGGKT CCCEECCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH ARDWAMRQDFRCGCWLMENVKTAMSTITCNLDRSIWRDLMKKSGMISLMDAQARKQWDNN HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHHCCC LEGDDIPEISEANILSTFEQLHHSKADVFERGIINVFKGLSWDYKTNSPCQFGKKIIVNG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LVDHNRWGFKLNWGWRREQLADLERMLFLLDGKPIPDNRGDISNRLMEHIRDNPAKDVYE HCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH DEFFSIRYFQKGTAHLTFKRPELVEKMNDIISKYYPRMLASR HHHHEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEIQVNNDSDVITGHTEIISSTSIERIVTGRNAALLQIEELIQQLADISTLTSSIGGKT CCEECCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH ARDWAMRQDFRCGCWLMENVKTAMSTITCNLDRSIWRDLMKKSGMISLMDAQARKQWDNN HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHHCCC LEGDDIPEISEANILSTFEQLHHSKADVFERGIINVFKGLSWDYKTNSPCQFGKKIIVNG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LVDHNRWGFKLNWGWRREQLADLERMLFLLDGKPIPDNRGDISNRLMEHIRDNPAKDVYE HCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH DEFFSIRYFQKGTAHLTFKRPELVEKMNDIISKYYPRMLASR HHHHEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA