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The map label for this gene is ydfT [C]

Identifier: 170025345

GI number: 170025345

Start: 3421352

End: 3421807

Strand: Reverse

Name: ydfT [C]

Synonym: YPK_3126

Alternate gene names: 170025345

Gene position: 3421807-3421352 (Counterclockwise)

Preceding gene: 170025348

Following gene: 170025344

Centisome position: 72.97

GC content: 50.66

Gene sequence:

>456_bases
ATGAAATTAGAATCAGCAATTAAGCAGTTCAGCGCTAAGAGCCAGATGATTACAGATTCCCCTCGCGCCACATCTTCCGA
TTCGCTCAAAGGGCCGGATATGGCCGCCGCAATGGGAATGGTTGAGGCTCGGGCCAGTTTCGGCATGGCTGCATATTTGG
GTAAGGTCGGCATCAGCAAAGAGGACAGGATAAGAACCGTTGAGCAGCTTACTCAATTCGCCATGAAGAACGCCCCGAAA
CATGTCGGTAAAGCATCAGGCCGCCGAATGGCTCAATGCATCCTGGTGGATAACGTAGATACCACAACTGCCACCCAGCG
CGGTGGCGTTTATCTGATGGGACAGTTTAATCAGAACAGTGTTATTCATGATGCTTCATGGACGCTGGCCGAGTTAAAAA
CCGCTCTGCGTTCGTATTCCATCTTCCTCGAAGACAGTATCCAGGCACCGGTTTAA

Upstream 100 bases:

>100_bases
TAGAGCGAGTAACAATCCGCTGGCCCGCGATCGGTGACTTCAACGACATGATTATGAATGGTGCGGTGGTGTATGAGTGG
CCCTTATTGAGGACGGCATA

Downstream 100 bases:

>100_bases
AACCTCACTTTCTTAATTTGCACCCAATGCCATTCATCTGGCAGGGGTTTGCTCGTCTTCAATCGTTGTCTGGCGGCGCT
GGCTGTCAGCAAATTAAAAG

Product: antitermination protein

Products: NA

Alternate protein names: Phage Antitermination Protein; Antitermination Protein Q; Prophage Antitermination Protein; Fels-1 Prophage Chaparone; Chaperone

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKLESAIKQFSAKSQMITDSPRATSSDSLKGPDMAAAMGMVEARASFGMAAYLGKVGISKEDRIRTVEQLTQFAMKNAPK
HVGKASGRRMAQCILVDNVDTTTATQRGGVYLMGQFNQNSVIHDASWTLAELKTALRSYSIFLEDSIQAPV

Sequences:

>Translated_151_residues
MKLESAIKQFSAKSQMITDSPRATSSDSLKGPDMAAAMGMVEARASFGMAAYLGKVGISKEDRIRTVEQLTQFAMKNAPK
HVGKASGRRMAQCILVDNVDTTTATQRGGVYLMGQFNQNSVIHDASWTLAELKTALRSYSIFLEDSIQAPV
>Mature_151_residues
MKLESAIKQFSAKSQMITDSPRATSSDSLKGPDMAAAMGMVEARASFGMAAYLGKVGISKEDRIRTVEQLTQFAMKNAPK
HVGKASGRRMAQCILVDNVDTTTATQRGGVYLMGQFNQNSVIHDASWTLAELKTALRSYSIFLEDSIQAPV

Specific function: Positively Regulate Expression Of Some Phage Genes. Bacterial Host RNA Polymerase Modified By Antitermination Proteins Transcribes Through Termination Sites That Otherwise Prevent Expression Of The Regulated Genes (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16380; Mature: 16380

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLESAIKQFSAKSQMITDSPRATSSDSLKGPDMAAAMGMVEARASFGMAAYLGKVGISK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EDRIRTVEQLTQFAMKNAPKHVGKASGRRMAQCILVDNVDTTTATQRGGVYLMGQFNQNS
HHHHHHHHHHHHHHHHCCCHHHHHHCCHHHEEEEEECCCCCCCCCCCCCEEEEEECCCCC
VIHDASWTLAELKTALRSYSIFLEDSIQAPV
EEECCCHHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MKLESAIKQFSAKSQMITDSPRATSSDSLKGPDMAAAMGMVEARASFGMAAYLGKVGISK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EDRIRTVEQLTQFAMKNAPKHVGKASGRRMAQCILVDNVDTTTATQRGGVYLMGQFNQNS
HHHHHHHHHHHHHHHHCCCHHHHHHCCHHHEEEEEECCCCCCCCCCCCCEEEEEECCCCC
VIHDASWTLAELKTALRSYSIFLEDSIQAPV
EEECCCHHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA