Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025292

Identifier: 170025292

GI number: 170025292

Start: 3380532

End: 3382160

Strand: Reverse

Name: 170025292

Synonym: YPK_3073

Alternate gene names: NA

Gene position: 3382160-3380532 (Counterclockwise)

Preceding gene: 170025293

Following gene: 170025288

Centisome position: 72.12

GC content: 52.36

Gene sequence:

>1629_bases
ATGAAAACATGGATAGCGCGTTTTTTAGGTAAAGATATTTCAATTGATTTTCCAGCCCCTTGGGCGGCCGATAGCACGGC
AATTTATCGTTGGTTGGCGACTTGGCCGGATAGCGATGGGCCTCTGCCCGCAGAGGCAGAAACCTTGCCGGATGAGCCTT
CGGCCATTGAGGGTAAAATCCGGTGGTCGGCTGGAGCGCTTGATGGTGTCTTTGGGCACCATGTTGCAGAGGCTGATGAT
GAAACTCCGGTTGAGGCCATCATGGCGGCACTGAGAAGTGTGTTGCATAAGCCGCAGCAGCAGGATATCGAGCAACTGTA
TCGTTTGTTGTGCCATGCGTCGCCGTTAAATTATCTCGATGTCTTGCTCCCTGCGGTTGCGCAAGATCCGCAACTGCCCG
CCAATAAATTGCAGGTGTTGGCAGAATGGCTGGCAACCGAAAGCCCAGATCGCAACGCCGTTAAGGTAGCCATAGCGCTA
TTGGGCTTTTTCCCAACGCAGAAAAGTTGTCAGATACTCAGTACATTGGGGGCACATGACGAGTTTACGCTTTATGCGGC
AGTGGCACTGAGATCCATACTGCCAGAGGATGAATATGAACGTGCCTGGCTTGCGATGGCGAAGCGTGCTGGTGGCTGGG
GAAGAGTGCAGTTGATCGAGCGTTTGCCCGAATTTTTGAGCAAACAGAGTCGCGATTGGTTGTTGCGTGAGGGTTACCGT
AACGCGGTGATGTATGAATACACTGCCTGGCATTGTGCGACTCACGGGCAATTACTTCAGGCAATGCAACAACTTAAGAC
AATGCAAAAACAGCCCGATGCGCCGCTATTACTGGGGGCTGCAGAGATTTTGCAGGCGTTAATTAACGGCGGCCCAGCGC
AAAATATGCATGATTACGCCGAAGGTGCGCTGGCTTGCGAATACTATCTGCGCTGTTTGCAGGCGGCTCCCCCGGCAGAA
ATACAGCATTATCTGGCGGCGAGTGAGATTGCGCGTTTTGCACAGGAACAAAATAGCGAAGAGGAGGGCGTATGGGATCA
GGCACAGTGTAACAACTTGGTCGAATTGGCCAATGTTGTCATGGCACTGCCGGAATGGTCGGGTATCATCGCCAATAACT
TGCAGGGAAGTGATACGTATCTTTTTAACCTGGCCGTTTCCGCTAGCCGGTTACGCCAGCAGGATCCGTGGGAGAGTATT
TTCGCACGGCAGTTGGCGGATGCAGCAGATAACAATTGGTACCAGTTAATGCAGACTGCCCAGCCTGAGCATATCGCCAG
AGTGATATCGCTGGCTGAACAGCAGTTGGATTTAGAGGCTATCGCTTCCGGGCCAGGAATGACTATGGGGCTCGGGTTGG
AGTACCAGCAGCATCAGGCATTGGATTTTGTACTGCAGGATCTGAAAAAATTCCCAGGAATGGGCTGGTCATTGTTGGCG
GTGGGGTTACGTAGTGAGAGGATCCGTGACCGGTCTATGGCGCTAAACGCATTGGACGTTTGGCCTCAGGATGATTGGTC
GCCTGATATGTCACAGGCGTTGGCGGATAGTTTATGTCATGAGCCCGATGAACAGATGCGGGAGCGTTTGCATAAGTTAT
GTGTCAATCTTGGGATCACCACGGGCTGA

Upstream 100 bases:

>100_bases
AGGCCAATGTTCGGCAGGCACCCCTGCCAAATAGCCCGGTTTGTCGCGACCAATCGCTGGATCAACGGCTTTATCGCACG
GTGATGTTAAGGATAGAAAA

Downstream 100 bases:

>100_bases
CCCAGATAGTTTTTGAAAAACGCCCTGGCAGAGATGGAAAAGCAGCAGGGCGTTAGCAAAGCATTGAAAGCTCAGTCATT
ACAATGAATTGATTTCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKTWIARFLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD
ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQVLAEWLATESPDRNAVKVAIAL
LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR
NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE
IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI
FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMTMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA
VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG

Sequences:

>Translated_542_residues
MKTWIARFLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD
ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQVLAEWLATESPDRNAVKVAIAL
LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR
NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE
IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI
FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMTMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA
VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG
>Mature_542_residues
MKTWIARFLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD
ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQVLAEWLATESPDRNAVKVAIAL
LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR
NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE
IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI
FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMTMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA
VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60458; Mature: 60458

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTWIARFLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKI
CHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
RWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLD
EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH
VLLPAVAQDPQLPANKLQVLAEWLATESPDRNAVKVAIALLGFFPTQKSCQILSTLGAHD
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
EFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYA
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHH
EGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
MALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESIFARQLADAADNNWYQLMQTA
HHCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC
QPEHIARVISLAEQQLDLEAIASGPGMTMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGIT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
TG
CC
>Mature Secondary Structure
MKTWIARFLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKI
CHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
RWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLD
EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH
VLLPAVAQDPQLPANKLQVLAEWLATESPDRNAVKVAIALLGFFPTQKSCQILSTLGAHD
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
EFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYA
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHH
EGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
MALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESIFARQLADAADNNWYQLMQTA
HHCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC
QPEHIARVISLAEQQLDLEAIASGPGMTMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGIT
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
TG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA