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The map label for this gene is ybhR [H]

Identifier: 170025125

GI number: 170025125

Start: 3197553

End: 3198659

Strand: Direct

Name: ybhR [H]

Synonym: YPK_2903

Alternate gene names: 170025125

Gene position: 3197553-3198659 (Clockwise)

Preceding gene: 170025124

Following gene: 170025127

Centisome position: 68.19

GC content: 47.88

Gene sequence:

>1107_bases
ATGTTTCATCGCCTATACACACTGATTATTAAAGAATTGCAGTCGCTGTTACGCGAGCCACAGACTCGTGCAATATTAAT
TTTGCCCGTAATATTGCAGGTTATCTTGTTCCCGTTCGCCGCGACGCTGGAAGTGACGAATGCCACTATCGCGATTTACA
GTGAAGACAGCGGCAAAGCCTCGGTAGAGTTGACCCAACGTTTTGCCAAAGCGGCCGCATTTTCGAATGTGCTGCTCCTG
CACAGCCCCCACGAGATCCAACCGGTTATTGATAATCAAAAAGCCTTGCTGTTGATCCGCTTTCCCGCACAGTTCAGCGC
CGATCTGGCCAACGGTAAAACCACACAGCTCCAGCTCGTTCTGGATGGGCGTAATTCCAACAGTGCGCAGATCGCGGCGA
ATTATATTCAGCAAATCGTGCAAAATTACCAGTTGGAATTGACCAGCGGCCAGATCAAACCCAATAACAGCGAGTTGGTC
ATCAGGAATTGGTATAACCCGAATCTGGACTATAAATGGTTCGTAGTACCGTCATTGATTGCCATGATCACCACCATCGG
TGTACTGATAGTGACCTCGCTGTCAGTGGCCCGCGAGCGCGAGCAAGGGACGATGGAGCAATTGTTGGTTTCACCACTGA
CAACATGGCAGATTTTTATCGGCAAAGCCGTTCCTGCACTGATTGTCGCGACGTTCCAGGCTTCTATTGTGTTGTTAATT
GGCATCTTTTTCTACCAGATCCCTTTCGCCGGTTCGTTGGCTCTGTTTTACGGCACGATGTTGCTTTATGGCTTGTCTCT
GGTCGGTTTTGGTCTATTGATCTCCTCGTTATGCTCAACTCAGCAGCAGGCGTTTATTGGCGTATTTGTCTTTATGATGC
CTGCTATTTTGCTTTCTGGTTATGTCTCTCCGGTAGAGAACATGCCAATCTGGCTGCAAAATATCACTTGGATCAATCCT
ATTCGTCATTTTACTGACATCACCAAACAGATTTATCTCAAGGATGCCAGTTTCGATATTATCTGGCACAGTCTGTGGCC
ACTGTTGGTGATCACTGCCACTACGGGCAGTGCGGCTTATGGTATGTTTCGACGAAAAATCGCCTAG

Upstream 100 bases:

>100_bases
TTTGGTGGTTAATCTGCTGTTTCTGATCGTATCAGCCGTCGTGTTTATCGGCCTGACCGCCTGGAAGACCCGACGTCGGC
TGGATTAAAGGAAGCGTAAA

Downstream 100 bases:

>100_bases
GCGTTTCAGGGGCAGCGCACCGCCTAGGTGCGGATAAATTACAGCTTTCTGATTTCAGTGATATAGGTAATAGCGGCACT
CTCTACGAAATTGGGGACAT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MFHRLYTLIIKELQSLLREPQTRAILILPVILQVILFPFAATLEVTNATIAIYSEDSGKASVELTQRFAKAAAFSNVLLL
HSPHEIQPVIDNQKALLLIRFPAQFSADLANGKTTQLQLVLDGRNSNSAQIAANYIQQIVQNYQLELTSGQIKPNNSELV
IRNWYNPNLDYKWFVVPSLIAMITTIGVLIVTSLSVAREREQGTMEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
GIFFYQIPFAGSLALFYGTMLLYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPIWLQNITWINP
IRHFTDITKQIYLKDASFDIIWHSLWPLLVITATTGSAAYGMFRRKIA

Sequences:

>Translated_368_residues
MFHRLYTLIIKELQSLLREPQTRAILILPVILQVILFPFAATLEVTNATIAIYSEDSGKASVELTQRFAKAAAFSNVLLL
HSPHEIQPVIDNQKALLLIRFPAQFSADLANGKTTQLQLVLDGRNSNSAQIAANYIQQIVQNYQLELTSGQIKPNNSELV
IRNWYNPNLDYKWFVVPSLIAMITTIGVLIVTSLSVAREREQGTMEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
GIFFYQIPFAGSLALFYGTMLLYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPIWLQNITWINP
IRHFTDITKQIYLKDASFDIIWHSLWPLLVITATTGSAAYGMFRRKIA
>Mature_368_residues
MFHRLYTLIIKELQSLLREPQTRAILILPVILQVILFPFAATLEVTNATIAIYSEDSGKASVELTQRFAKAAAFSNVLLL
HSPHEIQPVIDNQKALLLIRFPAQFSADLANGKTTQLQLVLDGRNSNSAQIAANYIQQIVQNYQLELTSGQIKPNNSELV
IRNWYNPNLDYKWFVVPSLIAMITTIGVLIVTSLSVAREREQGTMEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
GIFFYQIPFAGSLALFYGTMLLYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPIWLQNITWINP
IRHFTDITKQIYLKDASFDIIWHSLWPLLVITATTGSAAYGMFRRKIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=85.558583106267, Blast_Score=644, Evalue=0.0,
Organism=Escherichia coli, GI1787011, Length=336, Percent_Identity=25.8928571428571, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI48994943, Length=354, Percent_Identity=24.0112994350282, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI226510979, Length=375, Percent_Identity=26.1333333333333, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI85725260, Length=375, Percent_Identity=21.6, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI85725262, Length=375, Percent_Identity=21.6, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41142; Mature: 41142

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHRLYTLIIKELQSLLREPQTRAILILPVILQVILFPFAATLEVTNATIAIYSEDSGKA
CHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCH
SVELTQRFAKAAAFSNVLLLHSPHEIQPVIDNQKALLLIRFPAQFSADLANGKTTQLQLV
HHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEEE
LDGRNSNSAQIAANYIQQIVQNYQLELTSGQIKPNNSELVIRNWYNPNLDYKWFVVPSLI
EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVLIVTSLSVAREREQGTMEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFFYQIPFAGSLALFYGTMLLYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPIWLQNITWINPIRHFTDITKQIYLKDASFDIIWHSLWPLLVITATTGSAAY
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHEEEEEECCCCHHH
GMFRRKIA
HHHHHHCC
>Mature Secondary Structure
MFHRLYTLIIKELQSLLREPQTRAILILPVILQVILFPFAATLEVTNATIAIYSEDSGKA
CHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCH
SVELTQRFAKAAAFSNVLLLHSPHEIQPVIDNQKALLLIRFPAQFSADLANGKTTQLQLV
HHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEEE
LDGRNSNSAQIAANYIQQIVQNYQLELTSGQIKPNNSELVIRNWYNPNLDYKWFVVPSLI
EECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVLIVTSLSVAREREQGTMEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFFYQIPFAGSLALFYGTMLLYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPIWLQNITWINPIRHFTDITKQIYLKDASFDIIWHSLWPLLVITATTGSAAY
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHEEEEEECCCCHHH
GMFRRKIA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]