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The map label for this gene is ybhS [H]

Identifier: 170025124

GI number: 170025124

Start: 3196365

End: 3197540

Strand: Direct

Name: ybhS [H]

Synonym: YPK_2902

Alternate gene names: 170025124

Gene position: 3196365-3197540 (Clockwise)

Preceding gene: 170025123

Following gene: 170025125

Centisome position: 68.16

GC content: 51.02

Gene sequence:

>1176_bases
ATGGCCGAGCAGAATATTTCGCCGGTAGCTAAGGGCGAGACTTATCAAGACACCGGATTCTCTTGGCGGCGTCTGCGTGC
CTTATGCCACAAAGAAACTCGGCAAATTTTACGTGACCCCAGCAGTGGGCTGATCGCGGTGGTCATTCCCCTCATGCTGC
TGTTTATTTTTGGCTATGGTATTAACCTTGATTCCAGCAAATTGCATGTGGGCATTTTACTGGAGCAGCAGAGTAAACCG
GCGCAAGATTTGGCTAACGCCTTCGCTAATTCGCCTTATATTGCCGCGCAAATCAGTGATGACCGCGAAGCACTGATTCA
TACCATGCAAGCCGGTACGATCCGTGGGCTCATTGTTATTCCGAATGACTTTGCCGAACAACTCGCGCGCCCTGAAGGTA
AAGCACCGATTCAGGTGATCACCGATGGCAGTGAACCCAATACCGCCAATTTTGTGCAAGGCTATGCACAAGGGGTCTGG
CAACTTTGGCAACAGCAACAGGCACAGAATACTGGGCAAAAAAATGATCCGCTCATTGAGATTCAGGTGCGCTATTGGTT
TAACCCCGCGGCAATCAGCCGACACTTTATTATTCCCGGCGCTATCACCATTATTATGACGGTCATCGGGGCGATTTTGA
CCTCGCTGGTTATCGCCCGCGAGTGGGAGCGCGGTACGATGGAGGCGCTGTTATCTACTCAGGTCACACGCAGTGAATTA
CTGCTATCAAAACTTCTTCCCTATTATGTCCTTGGCATGTTCGCCATGGCGCTGTGCATGCTGGTATCGGTGTTCATTCT
GGGGGTGCCCTATCGCGGTTCGCTGGGGATCTTGTTCATCACCACCAGCCTGTTTTTAGCCAGTACATTGGGGATGGGGT
TGTTGATCTCCACGCTGACTCGCAACCAATTTAACGCCGCGATGATCGCGTTGAACGCGGCATTTTTGCCTGCGGTAATG
CTATCTGGTTTTATTTTTGAAATTGACAGTATGCCTGCCGTCGTTCGAGCCGTAACCTATATCATTCCTGCCCGCTACTT
TGTCAGCAGCCTGCAAACGCTGTTTCTGGCGGGAAATATCGGTACTGTTTTGGTGGTTAATCTGCTGTTTCTGATCGTAT
CAGCCGTCGTGTTTATCGGCCTGACCGCCTGGAAGACCCGACGTCGGCTGGATTAA

Upstream 100 bases:

>100_bases
CAACAGGTTGCCAGTGATGATGACCCCAATCCGTCAATGGAAACGGCGTTTATCGAATTGGTTCTGCGTTATGACCAACA
GCATGATAAGGAGTAAACCC

Downstream 100 bases:

>100_bases
AGGAAGCGTAAAATGTTTCATCGCCTATACACACTGATTATTAAAGAATTGCAGTCGCTGTTACGCGAGCCACAGACTCG
TGCAATATTAATTTTGCCCG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MAEQNISPVAKGETYQDTGFSWRRLRALCHKETRQILRDPSSGLIAVVIPLMLLFIFGYGINLDSSKLHVGILLEQQSKP
AQDLANAFANSPYIAAQISDDREALIHTMQAGTIRGLIVIPNDFAEQLARPEGKAPIQVITDGSEPNTANFVQGYAQGVW
QLWQQQQAQNTGQKNDPLIEIQVRYWFNPAAISRHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRSEL
LLSKLLPYYVLGMFAMALCMLVSVFILGVPYRGSLGILFITTSLFLASTLGMGLLISTLTRNQFNAAMIALNAAFLPAVM
LSGFIFEIDSMPAVVRAVTYIIPARYFVSSLQTLFLAGNIGTVLVVNLLFLIVSAVVFIGLTAWKTRRRLD

Sequences:

>Translated_391_residues
MAEQNISPVAKGETYQDTGFSWRRLRALCHKETRQILRDPSSGLIAVVIPLMLLFIFGYGINLDSSKLHVGILLEQQSKP
AQDLANAFANSPYIAAQISDDREALIHTMQAGTIRGLIVIPNDFAEQLARPEGKAPIQVITDGSEPNTANFVQGYAQGVW
QLWQQQQAQNTGQKNDPLIEIQVRYWFNPAAISRHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRSEL
LLSKLLPYYVLGMFAMALCMLVSVFILGVPYRGSLGILFITTSLFLASTLGMGLLISTLTRNQFNAAMIALNAAFLPAVM
LSGFIFEIDSMPAVVRAVTYIIPARYFVSSLQTLFLAGNIGTVLVVNLLFLIVSAVVFIGLTAWKTRRRLD
>Mature_390_residues
AEQNISPVAKGETYQDTGFSWRRLRALCHKETRQILRDPSSGLIAVVIPLMLLFIFGYGINLDSSKLHVGILLEQQSKPA
QDLANAFANSPYIAAQISDDREALIHTMQAGTIRGLIVIPNDFAEQLARPEGKAPIQVITDGSEPNTANFVQGYAQGVWQ
LWQQQQAQNTGQKNDPLIEIQVRYWFNPAAISRHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRSELL
LSKLLPYYVLGMFAMALCMLVSVFILGVPYRGSLGILFITTSLFLASTLGMGLLISTLTRNQFNAAMIALNAAFLPAVML
SGFIFEIDSMPAVVRAVTYIIPARYFVSSLQTLFLAGNIGTVLVVNLLFLIVSAVVFIGLTAWKTRRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=372, Percent_Identity=77.9569892473118, Blast_Score=579, Evalue=1e-166,
Organism=Escherichia coli, GI48994943, Length=357, Percent_Identity=33.8935574229692, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=27.7611940298507, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI226510979, Length=353, Percent_Identity=24.929178470255, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24650853, Length=163, Percent_Identity=28.2208588957055, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24650855, Length=163, Percent_Identity=28.2208588957055, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 43066; Mature: 42935

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQNISPVAKGETYQDTGFSWRRLRALCHKETRQILRDPSSGLIAVVIPLMLLFIFGYG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
INLDSSKLHVGILLEQQSKPAQDLANAFANSPYIAAQISDDREALIHTMQAGTIRGLIVI
CCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEE
PNDFAEQLARPEGKAPIQVITDGSEPNTANFVQGYAQGVWQLWQQQQAQNTGQKNDPLIE
CCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IQVRYWFNPAAISRHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRSEL
EEEEEEECHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLSKLLPYYVLGMFAMALCMLVSVFILGVPYRGSLGILFITTSLFLASTLGMGLLISTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNQFNAAMIALNAAFLPAVMLSGFIFEIDSMPAVVRAVTYIIPARYFVSSLQTLFLAGNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTVLVVNLLFLIVSAVVFIGLTAWKTRRRLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEQNISPVAKGETYQDTGFSWRRLRALCHKETRQILRDPSSGLIAVVIPLMLLFIFGYG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
INLDSSKLHVGILLEQQSKPAQDLANAFANSPYIAAQISDDREALIHTMQAGTIRGLIVI
CCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEE
PNDFAEQLARPEGKAPIQVITDGSEPNTANFVQGYAQGVWQLWQQQQAQNTGQKNDPLIE
CCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
IQVRYWFNPAAISRHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRSEL
EEEEEEECHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLSKLLPYYVLGMFAMALCMLVSVFILGVPYRGSLGILFITTSLFLASTLGMGLLISTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RNQFNAAMIALNAAFLPAVMLSGFIFEIDSMPAVVRAVTYIIPARYFVSSLQTLFLAGNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTVLVVNLLFLIVSAVVFIGLTAWKTRRRLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]