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The map label for this gene is ygbL [H]

Identifier: 170025049

GI number: 170025049

Start: 3110856

End: 3111587

Strand: Reverse

Name: ygbL [H]

Synonym: YPK_2825

Alternate gene names: 170025049

Gene position: 3111587-3110856 (Counterclockwise)

Preceding gene: 170025050

Following gene: 170025048

Centisome position: 66.35

GC content: 51.91

Gene sequence:

>732_bases
GTGAACAGCCCCCCGTTTTCAGAGCCGCCACCATCTTCGGAGCCGCCACCAGCTTCAAAACTGTCACCACCTGCCAAACA
AGTACCCTTTTCGGAGCAACAAGTGCGTGATGATTTGGTGAACTACGCCCGCTCATTATTCCAACGGGGGTTGAGCAGTG
GGGGTTCCGGCAATATTAGCGTCAAGCTGCCTGACGGTAGCTTTCTGGTCACTCCGACCAATTCCTGCCTGGGTGAATTG
GATAGCCAAACACTGAGTAAACTCGATGCCGAGGGGAACCACATCAGCGGTGACAAACCGTCGAAAGAGGTGCCGATGCA
TTTGGCAATGTACCGTGCCAGATCCACGTGCGGGGCGGTGGTTCATTTGCACTCACCGTATCTGACCGCCTTGTCATGTC
TCACAAATATTGATCATACGAATTGTTTGCCCCCCATTACACCTTACTATGTGATGCGCATCGGGCGTCTTCCTTTGTTG
TCTTATATGAAACCCGGCGATCCGGCCATTGCCACCGCCCTTGCCGATACCGCACGCGATCACAATGCCGTTTTGCTGGC
GAACCATGGCCCGGTTGTCAGTGGTTCAACGCTGCGAGAAGCGGTGTTCAACGCGGAAGAACTTGAAGATACGGCACGGC
TCTATTTTCTGATAAAGCCTTATGATTACAGTCAATTAACAACCTCATCCATTGATGAGTTGGCTCAATCGTACCGCAAC
AAAATAGGATAA

Upstream 100 bases:

>100_bases
TTCCGTGGGTACGTGACCCTCAGCGTGGTCTGATGCTGGCACTCAAGTCCGGTAATTTTGGTAATGAACACTTTTTTGTG
GCAGCACAGGAGTATGCAGA

Downstream 100 bases:

>100_bases
TGATGATGATCCCTGAACAGCGTCGTGACTTTATCTACCGCTACGTGCATGAGCAGAATGTCGCATCCTTCATGGATCTG
GCCGAGTTGATGAACGTGTC

Product: putative aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNSPPFSEPPPSSEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGEL
DSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLL
SYMKPGDPAIATALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRN
KIG

Sequences:

>Translated_243_residues
MNSPPFSEPPPSSEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGEL
DSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLL
SYMKPGDPAIATALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRN
KIG
>Mature_243_residues
MNSPPFSEPPPSSEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNISVKLPDGSFLVTPTNSCLGEL
DSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAVVHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLL
SYMKPGDPAIATALADTARDHNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRN
KIG

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=203, Percent_Identity=54.679802955665, Blast_Score=226, Evalue=7e-61,
Organism=Escherichia coli, GI1789164, Length=181, Percent_Identity=30.3867403314917, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 26311; Mature: 26311

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPPFSEPPPSSEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNIS
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VKLPDGSFLVTPTNSCLGELDSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAV
EEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEE
VHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIATALADTARD
EEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCC
HNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRN
CCEEEEECCCCCCCCHHHHHHHHCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
KIG
CCC
>Mature Secondary Structure
MNSPPFSEPPPSSEPPPASKLSPPAKQVPFSEQQVRDDLVNYARSLFQRGLSSGGSGNIS
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VKLPDGSFLVTPTNSCLGELDSQTLSKLDAEGNHISGDKPSKEVPMHLAMYRARSTCGAV
EEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEE
VHLHSPYLTALSCLTNIDHTNCLPPITPYYVMRIGRLPLLSYMKPGDPAIATALADTARD
EEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCC
HNAVLLANHGPVVSGSTLREAVFNAEELEDTARLYFLIKPYDYSQLTTSSIDELAQSYRN
CCEEEEECCCCCCCCHHHHHHHHCHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
KIG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]