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The map label for this gene is 170025039

Identifier: 170025039

GI number: 170025039

Start: 3101971

End: 3103377

Strand: Reverse

Name: 170025039

Synonym: YPK_2815

Alternate gene names: NA

Gene position: 3103377-3101971 (Counterclockwise)

Preceding gene: 170025040

Following gene: 170025038

Centisome position: 66.18

GC content: 55.01

Gene sequence:

>1407_bases
ATGTCACTCATTGGCAACACATTATCAGCGTTATTGGGAGGCAGTGACGACAGCTGGCAATGGTCGGAACACCTTCATCG
AGCCTCCTTTCGTGGCGTTCCCTTTGTGGTCGTCAGTGGGCAAGGTACCTTTGGTCGCCGCCAGGTAACACACAGCTACC
CCTATCGCGATACCAGCTATATCGAAGATTTGGGCCGCAATACGCGCAAAATTGTTCTGAAAGGGATTTTGATACAAAAC
AGCCAGATCTATACCGCACCTGATGTGATGACTCAACGTGACTCATTGATTGCGGCTTGTGAAATGTCGGGGCCGGGCAC
TCTGGTCCACCCGACACTGGGGGAAATGACGGTCAGCATCTCCGAGGCAGGGCTATTGATCGATGATAGCTTCAGCAGTG
AGCGGGTCTTTTCCTTTACCTTAACCGCCATCGAGTCTGGCCTGCGTGCCTTTGCTATTACTGGCTCCGCAGAAATGGGC
GCATCCATTCAATCCTCCTGGCTAGGGCTAAGTGCTAAAGCGGTTGCGGGTTTTATCTCAACGGTGAAAGGCGAAATGCG
CTCAGCGACTCAGGCGATAAAAACCCTGAAAAATACCGCTGCATTCTGGCGTCGGATGGTGACGGGCACGGCCAACGAAG
CCAGTAATTTGGGCAACGCCCTACGCTCAACCTTTGGTCGCAACCGCTATGGCCGCTATAACCACGGCACTGTCGGAGGC
AGCAGCACGGGAGCGACAACGACGGTTAGCCAACAAAATGACACGGCGGATTTATCCACGCTGGTGGCGCAACGGATGGC
ACTGGTGGTTGAAGGACGGGCGGCGCTCGACGCGGCGTTGGACGAGTTACTCGCCGCCAACAGTATTGAAAGCCATGCCG
ACAGTGTGCTGGCCGTGGTCAATGCCCTGCTGGCGACGGGCATCAGTACGCGGGATATTATCCGTATCATGGAAACCCTG
GCGCTAGCCCATGACGATACTTTTCGTGCCAACGACAGTGATAGGGCCGTCGCGGATGCCAGCCACCACTTAATGGCCAC
ATTATGCACTGGGGCGATGATCCAAGTGGCAGCGCAATATCAACCGGAAAGCTATGACGATGCGGTTGCGGTATTGGGCC
GGGTTTGCCTGGTGATTGACAATACTGCACTGGTCGCCGCCGACAGGGGGAATGATGAGACCTATCGTGCGCTGGTGCAG
ATGCGTGAATCTATCGTGACCGTGCTACAGCAGTCGGGGGCCAATCTATCACGGGTTGGCGAGGTCAGTTTTAACCGTTC
ACTACCGGCTCTGATGCTGGCAAACCGCCTCTATCAGGATGCATTACGCGGCGATGCGCTGGTGAAAATGGCTAATCCTA
TTCACCCGGCATTTATGCCCATCCGATTTAAGGCGCTGAATCTATGA

Upstream 100 bases:

>100_bases
TCTGTCTGTTCTCTCCGTCGCGGGCACTTTGTCAATAACCTCGAACCCGCTCCAGCGGGTTTTTTACTTTCTGTAAACCG
AAAACCGGACAGGAGAAAAA

Downstream 100 bases:

>100_bases
ATGATGACTTAACACTGGAGGTGGGTGGCCGGGCGATCACTGGCTGGAGCAAAGTAAAGGTAACGCGGAGCATTGAAAAA
TTACCCAGCAGTTTTGAACT

Product: DNA circulation family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSLIGNTLSALLGGSDDSWQWSEHLHRASFRGVPFVVVSGQGTFGRRQVTHSYPYRDTSYIEDLGRNTRKIVLKGILIQN
SQIYTAPDVMTQRDSLIAACEMSGPGTLVHPTLGEMTVSISEAGLLIDDSFSSERVFSFTLTAIESGLRAFAITGSAEMG
ASIQSSWLGLSAKAVAGFISTVKGEMRSATQAIKTLKNTAAFWRRMVTGTANEASNLGNALRSTFGRNRYGRYNHGTVGG
SSTGATTTVSQQNDTADLSTLVAQRMALVVEGRAALDAALDELLAANSIESHADSVLAVVNALLATGISTRDIIRIMETL
ALAHDDTFRANDSDRAVADASHHLMATLCTGAMIQVAAQYQPESYDDAVAVLGRVCLVIDNTALVAADRGNDETYRALVQ
MRESIVTVLQQSGANLSRVGEVSFNRSLPALMLANRLYQDALRGDALVKMANPIHPAFMPIRFKALNL

Sequences:

>Translated_468_residues
MSLIGNTLSALLGGSDDSWQWSEHLHRASFRGVPFVVVSGQGTFGRRQVTHSYPYRDTSYIEDLGRNTRKIVLKGILIQN
SQIYTAPDVMTQRDSLIAACEMSGPGTLVHPTLGEMTVSISEAGLLIDDSFSSERVFSFTLTAIESGLRAFAITGSAEMG
ASIQSSWLGLSAKAVAGFISTVKGEMRSATQAIKTLKNTAAFWRRMVTGTANEASNLGNALRSTFGRNRYGRYNHGTVGG
SSTGATTTVSQQNDTADLSTLVAQRMALVVEGRAALDAALDELLAANSIESHADSVLAVVNALLATGISTRDIIRIMETL
ALAHDDTFRANDSDRAVADASHHLMATLCTGAMIQVAAQYQPESYDDAVAVLGRVCLVIDNTALVAADRGNDETYRALVQ
MRESIVTVLQQSGANLSRVGEVSFNRSLPALMLANRLYQDALRGDALVKMANPIHPAFMPIRFKALNL
>Mature_467_residues
SLIGNTLSALLGGSDDSWQWSEHLHRASFRGVPFVVVSGQGTFGRRQVTHSYPYRDTSYIEDLGRNTRKIVLKGILIQNS
QIYTAPDVMTQRDSLIAACEMSGPGTLVHPTLGEMTVSISEAGLLIDDSFSSERVFSFTLTAIESGLRAFAITGSAEMGA
SIQSSWLGLSAKAVAGFISTVKGEMRSATQAIKTLKNTAAFWRRMVTGTANEASNLGNALRSTFGRNRYGRYNHGTVGGS
STGATTTVSQQNDTADLSTLVAQRMALVVEGRAALDAALDELLAANSIESHADSVLAVVNALLATGISTRDIIRIMETLA
LAHDDTFRANDSDRAVADASHHLMATLCTGAMIQVAAQYQPESYDDAVAVLGRVCLVIDNTALVAADRGNDETYRALVQM
RESIVTVLQQSGANLSRVGEVSFNRSLPALMLANRLYQDALRGDALVKMANPIHPAFMPIRFKALNL

Specific function: Unknown

COG id: COG4228

COG function: function code R; Mu-like prophage DNA circulation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein N [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009826
- ProDom:   PD332323 [H]

Pfam domain/function: PF07157 DNA_circ_N [H]

EC number: NA

Molecular weight: Translated: 50183; Mature: 50052

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIGNTLSALLGGSDDSWQWSEHLHRASFRGVPFVVVSGQGTFGRRQVTHSYPYRDTSY
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHH
IEDLGRNTRKIVLKGILIQNSQIYTAPDVMTQRDSLIAACEMSGPGTLVHPTLGEMTVSI
HHHHCCCHHHHHHHHEEEECCEEEECCCHHHCCCCEEEEEECCCCCCEECCCCCCEEEEE
SEAGLLIDDSFSSERVFSFTLTAIESGLRAFAITGSAEMGASIQSSWLGLSAKAVAGFIS
CCCCEEEECCCCCCEEEEEEHHHHHCCCEEEEEECCHHHCCHHHHHHCCCHHHHHHHHHH
TVKGEMRSATQAIKTLKNTAAFWRRMVTGTANEASNLGNALRSTFGRNRYGRYNHGTVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSTGATTTVSQQNDTADLSTLVAQRMALVVEGRAALDAALDELLAANSIESHADSVLAVV
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NALLATGISTRDIIRIMETLALAHDDTFRANDSDRAVADASHHLMATLCTGAMIQVAAQY
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
QPESYDDAVAVLGRVCLVIDNTALVAADRGNDETYRALVQMRESIVTVLQQSGANLSRVG
CCCCCHHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
EVSFNRSLPALMLANRLYQDALRGDALVKMANPIHPAFMPIRFKALNL
CCCCCCCCHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SLIGNTLSALLGGSDDSWQWSEHLHRASFRGVPFVVVSGQGTFGRRQVTHSYPYRDTSY
CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHH
IEDLGRNTRKIVLKGILIQNSQIYTAPDVMTQRDSLIAACEMSGPGTLVHPTLGEMTVSI
HHHHCCCHHHHHHHHEEEECCEEEECCCHHHCCCCEEEEEECCCCCCEECCCCCCEEEEE
SEAGLLIDDSFSSERVFSFTLTAIESGLRAFAITGSAEMGASIQSSWLGLSAKAVAGFIS
CCCCEEEECCCCCCEEEEEEHHHHHCCCEEEEEECCHHHCCHHHHHHCCCHHHHHHHHHH
TVKGEMRSATQAIKTLKNTAAFWRRMVTGTANEASNLGNALRSTFGRNRYGRYNHGTVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSTGATTTVSQQNDTADLSTLVAQRMALVVEGRAALDAALDELLAANSIESHADSVLAVV
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NALLATGISTRDIIRIMETLALAHDDTFRANDSDRAVADASHHLMATLCTGAMIQVAAQY
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
QPESYDDAVAVLGRVCLVIDNTALVAADRGNDETYRALVQMRESIVTVLQQSGANLSRVG
CCCCCHHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHC
EVSFNRSLPALMLANRLYQDALRGDALVKMANPIHPAFMPIRFKALNL
CCCCCCCCHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]