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The map label for this gene is spr [H]

Identifier: 170025009

GI number: 170025009

Start: 3072416

End: 3073000

Strand: Direct

Name: spr [H]

Synonym: YPK_2784

Alternate gene names: 170025009

Gene position: 3072416-3073000 (Clockwise)

Preceding gene: 170025008

Following gene: 170025010

Centisome position: 65.52

GC content: 46.32

Gene sequence:

>585_bases
ATGGTCAAGTCTCAACCTATTCTGAGATATATTCTGCGGGCGCTCCCTGCAGTTGCAGCAGCAGTAATGTTATCCGCATG
CAGTTCACCACAGGCTTCGAATGTAAATAATACGCAAACTGAGATGCGTGCAGTTAATGACAAAGATGGGCTTTTACTGC
AAGCCTCTCAGGATGAATTCGAAGCGATGGTTCGCAACGTTGACATCAAGTCAAAGATTTTAGAACAGTATGCAGGTTGG
AAAGGTGTTCGTTATCGTTTAGGCGGTAGCAGTAAACGCGGTATTGATTGTTCCGCATTTGTACAAACCACTTTCCGTGA
ACAGTTTGGTATGGATTTGCCGCGCTCAACATCTCAGCAGCAGGATCTCGGCAAGAAAGTCCAGCGGACTAAATTACGTC
CAGGTGATCTTGTTCTATTCCGCGCAGGCTCAACAGGGCGTCATGTCGGTATCTATTTAGGTAACGATAAATTTGTTCAT
GCATCGACCAGTGCCGGTGTAACGATATCGAACCTGAATGACGATTACTGGAATAAGCGTTATCGTGATGGGCGTCGAGT
GCTAAGTAGCAGTTCGAGCAGCTAG

Upstream 100 bases:

>100_bases
TTAAATGATTGTCTATTCTGTTCACAATCAATAATCTCGATTCGTTTGGTATTTTTGGTAGCGACATCCGTCGTAAGGAC
AGCAAGGGAAAACAACAACA

Downstream 100 bases:

>100_bases
CTGCTATTTATTCCTGTTGTTCAAAATACCAAACCAAACGTTGAAACGCTGTTTATGACAGCGTTTTTTATTGGCTCATC
TTCTGCCCTATCACCTTCCA

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVKSQPILRYILRALPAVAAAVMLSACSSPQASNVNNTQTEMRAVNDKDGLLLQASQDEFEAMVRNVDIKSKILEQYAGW
KGVRYRLGGSSKRGIDCSAFVQTTFREQFGMDLPRSTSQQQDLGKKVQRTKLRPGDLVLFRAGSTGRHVGIYLGNDKFVH
ASTSAGVTISNLNDDYWNKRYRDGRRVLSSSSSS

Sequences:

>Translated_194_residues
MVKSQPILRYILRALPAVAAAVMLSACSSPQASNVNNTQTEMRAVNDKDGLLLQASQDEFEAMVRNVDIKSKILEQYAGW
KGVRYRLGGSSKRGIDCSAFVQTTFREQFGMDLPRSTSQQQDLGKKVQRTKLRPGDLVLFRAGSTGRHVGIYLGNDKFVH
ASTSAGVTISNLNDDYWNKRYRDGRRVLSSSSSS
>Mature_194_residues
MVKSQPILRYILRALPAVAAAVMLSACSSPQASNVNNTQTEMRAVNDKDGLLLQASQDEFEAMVRNVDIKSKILEQYAGW
KGVRYRLGGSSKRGIDCSAFVQTTFREQFGMDLPRSTSQQQDLGKKVQRTKLRPGDLVLFRAGSTGRHVGIYLGNDKFVH
ASTSAGVTISNLNDDYWNKRYRDGRRVLSSSSSS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=191, Percent_Identity=68.586387434555, Blast_Score=277, Evalue=3e-76,
Organism=Escherichia coli, GI1788001, Length=124, Percent_Identity=44.3548387096774, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=36.2903225806452, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 21482; Mature: 21482

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSQPILRYILRALPAVAAAVMLSACSSPQASNVNNTQTEMRAVNDKDGLLLQASQDEF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECHHHH
EAMVRNVDIKSKILEQYAGWKGVRYRLGGSSKRGIDCSAFVQTTFREQFGMDLPRSTSQQ
HHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
QDLGKKVQRTKLRPGDLVLFRAGSTGRHVGIYLGNDKFVHASTSAGVTISNLNDDYWNKR
HHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCCHHHHHH
YRDGRRVLSSSSSS
HHHHHHHHHCCCCC
>Mature Secondary Structure
MVKSQPILRYILRALPAVAAAVMLSACSSPQASNVNNTQTEMRAVNDKDGLLLQASQDEF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECHHHH
EAMVRNVDIKSKILEQYAGWKGVRYRLGGSSKRGIDCSAFVQTTFREQFGMDLPRSTSQQ
HHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
QDLGKKVQRTKLRPGDLVLFRAGSTGRHVGIYLGNDKFVHASTSAGVTISNLNDDYWNKR
HHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCCHHHHHH
YRDGRRVLSSSSSS
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]