Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is ybjC [C]

Identifier: 170024957

GI number: 170024957

Start: 3012734

End: 3013048

Strand: Reverse

Name: ybjC [C]

Synonym: YPK_2732

Alternate gene names: 170024957

Gene position: 3013048-3012734 (Counterclockwise)

Preceding gene: 170024965

Following gene: 170024956

Centisome position: 64.25

GC content: 47.94

Gene sequence:

>315_bases
ATGCGCTCGTTAGGAAATATGCCCCGGATTGTGATCATTTCAGAAGTACTGGGGTTGTTGTTATTGGTTGTTGCTTATTT
AAGCATCAATAATTATTTGTCATTGCCAGGGGAAATGGGGACACCAACGGCTGCCATTATGATGATTTTTGTGGGGGTCG
GCCTGATGATCCCGGCGGCAGTGTGTATCGTCTGGCGGGTAGCCAGCGGTTTTGGTCCATTATTGGGCAGTGCTGACAGA
ATATCGACGCCACAGAAGGCGTCAGAGGAAAAACTGGCGGCGAAAAGTAAAAAATCGGGTCAGGATAACCACTAA

Upstream 100 bases:

>100_bases
TTCAAATCGGGTTTCCAAGGATTTGTCTCTCGCTTGCCGCCTTCCGCAACTCGAATTATGTTGGGTATAAACGCTCATAC
AGAGCCTGTCGGAGGAAAAG

Downstream 100 bases:

>100_bases
GATTTTATAAGCACATTGAGAATATCTAAGCCGAGGAACGGCCCAGATATCAAATTAGTCGGGATTGATCGTAGCGCTAT
CGGCCAATATTCCGTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADR
ISTPQKASEEKLAAKSKKSGQDNH

Sequences:

>Translated_104_residues
MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADR
ISTPQKASEEKLAAKSKKSGQDNH
>Mature_104_residues
MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAAVCIVWRVASGFGPLLGSADR
ISTPQKASEEKLAAKSKKSGQDNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787074, Length=104, Percent_Identity=39.4230769230769, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10997; Mature: 10997

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA