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The map label for this gene is yadA [H]

Identifier: 170024897

GI number: 170024897

Start: 2942264

End: 2944111

Strand: Reverse

Name: yadA [H]

Synonym: YPK_2672

Alternate gene names: 170024897

Gene position: 2944111-2942264 (Counterclockwise)

Preceding gene: 170024898

Following gene: 170024896

Centisome position: 62.78

GC content: 38.69

Gene sequence:

>1848_bases
ATGCAACGGATGCAATGCATATATATCGCCACTTGGTTAATCGCAGTATTTATCTCGCCGATAGCGATAGCTAACAATAC
TAATATTAATGGCAGTACCAATAATAACGGTAATGGTACAATCAATATTTTTGATGCCAGCAGTAATAACGATATTCATA
CACTAACCGGTCTTGGTAATGAGCTGTTGGGAGGATTTAGTAATCATCTTATCGACTCTCATAATAATACGATAAACGGG
GGTCAGAGTAACAACCTGGTAAGTAGCGATGGCAATACGATCAGCGCTATTAGCTTGGGCGATGGCCTCTTCTACGGCGC
GCAGAATAACACGTTAATAAACTCAAACAACAACCTACTTATTGTCACTCAGGGCAGTACTATAATAGATTCTGATAGTA
ATACTGTGTCTGGCATTAGTAATAATCTTATAGAGAGCAACAGCAATATTATCGGTAATGAAAATAGTTGTTATTCGGAT
CCCGCGTCCCCATCAGGAGCGTGGTGCGTTGACAATCAAAATACGCTCATTGGCAGTGATAACAATACGATCACTGGTGC
GCTGAATGGTCTTCACAACAGTCATAACAATGATATTATTGCTAGCTCTGTAAATAATTTAATGGATACGCATAATAATA
TTATCGCGGGAGGGCACTACAACACCATTAGTGGTGGTGGAAACAATGACATTTTTGGGAGTGAAAACAATGTTACTGAC
AGCACCGACGCCAATATCAATGGTAGTAATAACTACGTGATAGATGGGAATGGAATTGGTCGAGATGATTTGACTGAAGA
TAACTCTATATTGGGCGGCTCTGGCAATATGGGCGTGGGGGATTCAGTAACCGCGATTACCAATAGCGTGGTGTTCGGCG
GTAATACATCTGGTAATTCAACCGGCTCCACTCTGACAGATTCTGTATCGGTTAGCGGCAACGGTACATCGGGGAATAAT
GTTGTTAATATCGGAGGAGCGGCAAACGGTAATAATAGTGCTAGCTTAGGTACAGGCTCGGTATCCTCTGAAGGAGGAAT
TGCATTGGGTAGCGGTTCGATTGCTACACGGAATGATGAACTGAATATCGGTGATAGACAAATTACCAGCGTTAAAAAAG
GTGTTGAGAATACAGATACAATCAATGTTAGTCAGTTAAACGATAGCTTTGATGATATTCTGAATTTATCAAATGAATAT
TCTGATAACTCTTTTTCCACTGTCACTGAAAATATAAATAATTATACTGATGCCTCATTAGATACTGTGTTGAATACAAC
TGGTGAATATACCGACAACTCAATATTATTGGTTGCTAATGAAAGCAATAATTATACTGACAATGGCATGGAGAGTGTTA
GTAATCATGCAAATATCTACGCTGATGAATCTTTGTTAGCTATATATAATGAAGAGGCTAATTACATGTCTAATCTTATA
GATATGACGTTAAATAATGCTAATAACTATACTGATCTTTCAGTTAATACCATTATATATACCGGAAAACAATATACAGA
CTCTCGAATCAATGAGTACCAACGTACTTTTAAAAATGAATTTTTAACCTATTCTAATGGGAAATTTGGCGGTTTTGATA
AAGATATTAATCAAAAGCAGAAACAATTAAACGCGGGAATAGCGGCGACGATGGCTGCTGCGGTTATTCCTCAAAAATCG
GGTTCTAAAGTCTCTATTGGTGTCGGGCTTGCAGGATATAGCGATCAAGGCGCAGGATCTGTGGGAGCGATTTGGCATGT
AAATCAACGAATCACAATGAATACAACGATGACTTACGATACTCAACGTGGTGTTAGTTTATTAACGGGTTTATCTATCG
GCATATGA

Upstream 100 bases:

>100_bases
CGATAACGCGAGTCAATGTTTCTGCCGACACTGAAGGCGGTGTCGGTGTTGCAGCGGGTTTTGCTTTTGGCATTAATTAA
TGAATAAGGAAATTAAACGG

Downstream 100 bases:

>100_bases
TCGATACCCGTCGTCCTTCAAGATGTAGGGGTGAGCTGCCCTTATTACTCGGCCCGCCCTTGGGCCTCGCCTCTGCGAGG
CCGCTGCAAGCAGCGTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MQRMQCIYIATWLIAVFISPIAIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGNELLGGFSNHLIDSHNNTING
GQSNNLVSSDGNTISAISLGDGLFYGAQNNTLINSNNNLLIVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSD
PASPSGAWCVDNQNTLIGSDNNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNSTGSTLTDSVSVSGNGTSGNN
VVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDELNIGDRQITSVKKGVENTDTINVSQLNDSFDDILNLSNEY
SDNSFSTVTENINNYTDASLDTVLNTTGEYTDNSILLVANESNNYTDNGMESVSNHANIYADESLLAIYNEEANYMSNLI
DMTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQKQLNAGIAATMAAAVIPQKS
GSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYDTQRGVSLLTGLSIGI

Sequences:

>Translated_615_residues
MQRMQCIYIATWLIAVFISPIAIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGNELLGGFSNHLIDSHNNTING
GQSNNLVSSDGNTISAISLGDGLFYGAQNNTLINSNNNLLIVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSD
PASPSGAWCVDNQNTLIGSDNNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNSTGSTLTDSVSVSGNGTSGNN
VVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDELNIGDRQITSVKKGVENTDTINVSQLNDSFDDILNLSNEY
SDNSFSTVTENINNYTDASLDTVLNTTGEYTDNSILLVANESNNYTDNGMESVSNHANIYADESLLAIYNEEANYMSNLI
DMTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQKQLNAGIAATMAAAVIPQKS
GSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYDTQRGVSLLTGLSIGI
>Mature_615_residues
MQRMQCIYIATWLIAVFISPIAIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGNELLGGFSNHLIDSHNNTING
GQSNNLVSSDGNTISAISLGDGLFYGAQNNTLINSNNNLLIVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSD
PASPSGAWCVDNQNTLIGSDNNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNSTGSTLTDSVSVSGNGTSGNN
VVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDELNIGDRQITSVKKGVENTDTINVSQLNDSFDDILNLSNEY
SDNSFSTVTENINNYTDASLDTVLNTTGEYTDNSILLVANESNNYTDNGMESVSNHANIYADESLLAIYNEEANYMSNLI
DMTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQKQLNAGIAATMAAAVIPQKS
GSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYDTQRGVSLLTGLSIGI

Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes initial attachment and invasion of eukaryotic cells. Also protects the bacteria by being responsible for agglutination, serum resistance, complement

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008640
- InterPro:   IPR008635
- InterPro:   IPR008126
- InterPro:   IPR005594 [H]

Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]

EC number: NA

Molecular weight: Translated: 64309; Mature: 64309

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRMQCIYIATWLIAVFISPIAIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGN
CCCCEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCH
ELLGGFSNHLIDSHNNTINGGQSNNLVSSDGNTISAISLGDGLFYGAQNNTLINSNNNLL
HHHCCHHHHEECCCCCCCCCCCCCCEEECCCCEEEEEEECCCEEECCCCCEEEECCCCEE
IVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSDPASPSGAWCVDNQNTLIGSD
EEECCCEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEECC
NNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
CCEEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCCCCC
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNS
CCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCHHHEECEEEECCCCCCCC
TGSTLTDSVSVSGNGTSGNNVVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDE
CCCEEECEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCC
LNIGDRQITSVKKGVENTDTINVSQLNDSFDDILNLSNEYSDNSFSTVTENINNYTDASL
CCCCCHHHHHHHHCCCCCCEEEHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHH
DTVLNTTGEYTDNSILLVANESNNYTDNGMESVSNHANIYADESLLAIYNEEANYMSNLI
HHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCEEEECCCEEEEECCCHHHHHHHH
DMTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQ
HHEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHH
KQLNAGIAATMAAAVIPQKSGSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYD
HHHHCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEEC
TQRGVSLLTGLSIGI
CCCCHHHHHHHCCCC
>Mature Secondary Structure
MQRMQCIYIATWLIAVFISPIAIANNTNINGSTNNNGNGTINIFDASSNNDIHTLTGLGN
CCCCEEHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCH
ELLGGFSNHLIDSHNNTINGGQSNNLVSSDGNTISAISLGDGLFYGAQNNTLINSNNNLL
HHHCCHHHHEECCCCCCCCCCCCCCEEECCCCEEEEEEECCCEEECCCCCEEEECCCCEE
IVTQGSTIIDSDSNTVSGISNNLIESNSNIIGNENSCYSDPASPSGAWCVDNQNTLIGSD
EEECCCEEEECCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEECCCCEEEECC
NNTITGALNGLHNSHNNDIIASSVNNLMDTHNNIIAGGHYNTISGGGNNDIFGSENNVTD
CCEEEEEECCCCCCCCCCEEHHHHHHHHHCCCCEEECCCEEECCCCCCCCCCCCCCCCCC
STDANINGSNNYVIDGNGIGRDDLTEDNSILGGSGNMGVGDSVTAITNSVVFGGNTSGNS
CCCCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCHHHEECEEEECCCCCCCC
TGSTLTDSVSVSGNGTSGNNVVNIGGAANGNNSASLGTGSVSSEGGIALGSGSIATRNDE
CCCEEECEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCC
LNIGDRQITSVKKGVENTDTINVSQLNDSFDDILNLSNEYSDNSFSTVTENINNYTDASL
CCCCCHHHHHHHHCCCCCCEEEHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHH
DTVLNTTGEYTDNSILLVANESNNYTDNGMESVSNHANIYADESLLAIYNEEANYMSNLI
HHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCEEEECCCEEEEECCCHHHHHHHH
DMTLNNANNYTDLSVNTIIYTGKQYTDSRINEYQRTFKNEFLTYSNGKFGGFDKDINQKQ
HHEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHH
KQLNAGIAATMAAAVIPQKSGSKVSIGVGLAGYSDQGAGSVGAIWHVNQRITMNTTMTYD
HHHHCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEEEEEC
TQRGVSLLTGLSIGI
CCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2761389; 7934875; 2592347; 1548243 [H]