Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170024821

Identifier: 170024821

GI number: 170024821

Start: 2853902

End: 2854720

Strand: Reverse

Name: 170024821

Synonym: YPK_2596

Alternate gene names: NA

Gene position: 2854720-2853902 (Counterclockwise)

Preceding gene: 170024822

Following gene: 170024820

Centisome position: 60.88

GC content: 45.3

Gene sequence:

>819_bases
ATGAACGAAAAACATCAACAGCGGCATGTCGAACAAGAGATGGTTCAGGCCGCCATAAACGAACATTTTTCCCGACAGTC
CCGCCTTACTCCAAGATTAAAAAATTGGGAAGAAGATTTACCGGAGAATAATGAAGAACAGACGGTTCCCGGCCAGTTGG
TTCAGGTAACAGAAATCAATGATATCTGGATGGAACTCCCACGCTATGAAAATATCATGTGGGGAGGGGCTTGGTTGGGG
ATAATATCATCAATAGTACCTATGGTCGTAATGATATATATAGGCATTGACATTCTTTCATCAGAGTTTGATATCACGCT
TTTTCTTATAATGTTACTTGGTTTGTTTTTTATGCTTTCAATGTTTTTATTAAACTTGAGGATGGCTCTTTTTGTTCCCC
GAGACCAACCTATTCGCTTTAACCGCAAGCGTCAAAAAGTCTATGTCTTCGATTATCACCGGAAACAGTGGAATCCCTGG
GTGAAATGGCCCACCACGATCAAGGTATTTGACTGGGCGGATATTCACGGCGAGATAAGCCACGAATCGGACCGTTACGA
TCAGGGGTTCCGGCTCTATTGTGCAGTATGTAAACCCGGTACTTGGGACGTGGCTGAACGTTTTATTCTCAGCCGGGCAC
TGCGCCATATCGTGACTCAACGCAAATTATGGAGTCACTGCTGTCAGTATATGCAACATAAACCCGTGGTGATGGACCCC
CTTGAGCCGGGGCGGCCTGATAACTGGAAACCGCGTAAAAACATGTGTTGGTCGGAAGATATTGATCGGGAATCGACTAC
TGCACCGGCACCGGATTAA

Upstream 100 bases:

>100_bases
TTCAGCAGGCCGTGCTCAGCGTAAATTACTGGCCAGATAAAAGCGACCCGGAGAGTCTCATGACACTCTCCATGACTGTT
AATGATTAGGAAGGGCAAGG

Downstream 100 bases:

>100_bases
AGATTGTCTGCATAGAAAAGTAATCATGATTAGGAAGGGCAAGGATGAACGAAAAACATCAACAGCGGCATGTCGAACAA
GAGATGGTTCAGGCCGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEINDIWMELPRYENIMWGGAWLG
IISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLSMFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPW
VKWPTTIKVFDWADIHGEISHESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP
LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD

Sequences:

>Translated_272_residues
MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEINDIWMELPRYENIMWGGAWLG
IISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLSMFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPW
VKWPTTIKVFDWADIHGEISHESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP
LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD
>Mature_272_residues
MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEINDIWMELPRYENIMWGGAWLG
IISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLSMFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPW
VKWPTTIKVFDWADIHGEISHESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP
LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32477; Mature: 32477

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCCCCCCEEEEEEHH
DIWMELPRYENIMWGGAWLGIISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLS
HHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPWVKWPTTIKVFDWADIHGEIS
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCC
HESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNEKHQQRHVEQEMVQAAINEHFSRQSRLTPRLKNWEEDLPENNEEQTVPGQLVQVTEIN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCCCCCCEEEEEEHH
DIWMELPRYENIMWGGAWLGIISSIVPMVVMIYIGIDILSSEFDITLFLIMLLGLFFMLS
HHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MFLLNLRMALFVPRDQPIRFNRKRQKVYVFDYHRKQWNPWVKWPTTIKVFDWADIHGEIS
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCC
HESDRYDQGFRLYCAVCKPGTWDVAERFILSRALRHIVTQRKLWSHCCQYMQHKPVVMDP
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
LEPGRPDNWKPRKNMCWSEDIDRESTTAPAPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA