| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024799
Identifier: 170024799
GI number: 170024799
Start: 2826357
End: 2828717
Strand: Direct
Name: 170024799
Synonym: YPK_2574
Alternate gene names: NA
Gene position: 2826357-2828717 (Clockwise)
Preceding gene: 170024798
Following gene: 170024800
Centisome position: 60.27
GC content: 36.13
Gene sequence:
>2361_bases ATGCTTACGAGTGAATTTTTAAACGATGTAAAGCTCAGCCCCATGGCAACACTATTAGCCATTATTATAACCGCTATAGG GATGATCTCACTGTTTCTCGTATTACTGCTTTATTTAACTGATAATAGTATTGAAAAATTCCATCATGATTATCCACAAA TTTATCGAATAGAAACACAATTTAATCTGCCCAATGGTGAAAAAGTCAAATCGGCACAAGTCCCTTTGCCATTAATTACT GCATTACAAAATGAAAAAAACATCAAAGATGTCGCCTACGCTTTACGTTTGTTTATCGACTTACAGGTTAACGGTAAAAC ACAGGCTGACGTAGAAATTTATGCTGTTAGCCCTAATTTTTTAACGGCACTCAATCCCTATCGACAGAAAATACCTCATC TGTCACACAATGAAATTATCATTACGCCTGAGTTTAATCGCCAATATCTTCATTTAAATCACCCTAAAGGCCAGGTCATC ACGTTAGGAAAAAAAGGGAAATTCTTTATCAAAGATGTGGTTAACTTAAATACGTCCAGCCGCTTTAACACCCGCGCTGT CATTGCATTTTCTCCGGATATCATCGATGACTACCATGATAAAAGGCATGACTGGTACGATATGCATAGCTATCTCTTTG TCACCATGGTCGCCGGGGAAAAACCCACTCATGAGCAGTTAAAAACGCTGGTCACCCGGTATGCACCTCAACTCCCTGGC GCTCCGTTTAGTCCTGAAGAATTTATTCAATTATCCGCCCGTAATATTACCGATATACATTATGATGCTGAACTCCCCGA TGAAATGAGCACAGTTATTTCAAAATCATATCTTTATACCTTGTATATGGCGGGTTTCTTTATCTTTTTAACCACCACCA TGAACTTTTTCAATGTTAATAACATCGTAAATAAAAACAAAAAAAGCAGTTTTCAGATAAAGAAATCGGTTGGTGCCTCT AATTATCAATTACTGACAGAGTCATTTTTCATCGCAACACTGCAAGCGGTGTGTGTCCTCACACTGGCGTTTATCTTCCT CTCAATTTTGATGCAAGCATCTGAAAATGTCAGGGAATTGATTTTAACGCAAGAAACAGGCCGGCTAATATCATCATTTT CTGTAGCGTTCTTCTCACTCTATATTGCGATATTAATTTCGCATTACCTCTATCTATCAACCTCAGTTTTCCCTAATAAG TCATGGCATAATCATGCTTATAGTGCACACCCAATATCACATTACATTTACCAAGTAACGTTATCTATACAAATAGCCAT AGCAGGAATCATTATTTATCTTTGGGCAGGCATAATGACACAAATAGATTTTATGCAGAGTCATACGTTTGGTTATGAAA AAGAAAATGTCGTGACATTTCCACTAAGCGATGAATTAAAATCTTTAACATCATTAAATAGCTTACAAGATGAATTAAAT AATAGCATAGGTATCTCCCCAATCGCATTGAGTAGTTGGCGACCATTTGATATGTCAAGAACGACGACTTCGGTTTTTCA TCAAAATCAGCAGGAACAAGATAAACTCGTTTCCGTAAATATACTGAACGTGAACAAAAACTTCACCGACACTTGGGGAA TAAAAACATTAGCAGGCTACGAAAACCCTATTACACCCAGTAAAAATGATAATACTTATCATGCTATAGTGACAAAGACC TTTATGTCGGCGATGGGGAAATCATCAAGTGATGAGGTACTGAATACTCTTTTTTATATTAACGACAATGATGCTGAATA TACAGTTCGTATACTCAGGGTAGTTAATGACTTTTATCTTGCAGATCGAGATAAAAATACAACTCCATTGCTTATTCTCA TCAGTGATGAGGTGCAACGATATGGGGCACTGAAATTACATCATCAGAGTGATCTTAGTACCGTAAAAATGCTACTTGAA CGATATGGGGTCAATATTAACCAAATAAAACTTGCTGAACATATACACCAAGAATATTTTAATAATCACAATTTAATGAA AAAAACAATCAGCTTGGTTACCCTATTCTCAGTAGCCTTACTGCTCATAAGTACCATGATCATCGGAATAGCTGAATCAA AAAGGATCAGTAAAATATTAAAAATAATGGAGTCAGTAGGTGGCTCTCTATATACACATATCATTTTCTTTATACAGCAA AATGTAACCCCCGTACTGGTTGCTGTAGCAATAGCATTTCCGATTGGTTTTATCCTATTACAAAAATGGCTGAGTAAATA TAACTTCATTAATAATCTCTCATACCTCTATGCCTTTGGAACACTTTTGCTGTTTATGGTGAGTATCGTCAGTGTAATGA CCTTGTCACTCATTTTATCGCATACCAAAAAGAATAAATAA
Upstream 100 bases:
>100_bases GCTTTGCAGAAGACTAAGTCCATCAAGCATTTTAGACGTTATAAATAAAACAAAAATAATAATATCACTAAATATAATAA TCCCAGTGAGATATTCTTGT
Downstream 100 bases:
>100_bases CATGGATATAAAATTAGAAAAAAAGATAAATATCAACAGTAGAGAGAAAATAGTTATACTTTCCGTGTTACTTATTCTAT TTTTAAGCTGCTTTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDNSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIVTKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNINQIKLAEHIHQEYFNNHNLMKKTISLVTLFSVALLLISTMIIGIAESKRISKILKIMESVGGSLYTHIIFFIQQ NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGTLLLFMVSIVSVMTLSLILSHTKKNK
Sequences:
>Translated_786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDNSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIVTKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNINQIKLAEHIHQEYFNNHNLMKKTISLVTLFSVALLLISTMIIGIAESKRISKILKIMESVGGSLYTHIIFFIQQ NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGTLLLFMVSIVSVMTLSLILSHTKKNK >Mature_786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDNSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFFIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIVTKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNINQIKLAEHIHQEYFNNHNLMKKTISLVTLFSVALLLISTMIIGIAESKRISKILKIMESVGGSLYTHIIFFIQQ NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGTLLLFMVSIVSVMTLSLILSHTKKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89551; Mature: 89551
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDNSIEKFHHDYPQIYRIETQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEE FNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNF ECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCH LTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSS HHHCCHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCC RFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG CCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCC APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVN CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVREL HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEE LSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGY CCCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCC ENPITPSKNDNTYHAIVTKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYL CCCCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHH ADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNINQIKLAEHIHQEYF CCCCCCCCCEEEEEECHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NNHNLMKKTISLVTLFSVALLLISTMIIGIAESKRISKILKIMESVGGSLYTHIIFFIQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHC NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGTLLLFMVSIVSVMTLSLILS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTKKNK HHCCCC >Mature Secondary Structure MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDNSIEKFHHDYPQIYRIETQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEE FNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNF ECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCH LTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFFIKDVVNLNTSS HHHCCHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHCCCCCC RFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG CCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCC APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVN CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVREL HHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTQETGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEE LSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC NSIGISPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGY CCCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCC ENPITPSKNDNTYHAIVTKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYL CCCCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHH ADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNINQIKLAEHIHQEYF CCCCCCCCCEEEEEECHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NNHNLMKKTISLVTLFSVALLLISTMIIGIAESKRISKILKIMESVGGSLYTHIIFFIQQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHC NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGTLLLFMVSIVSVMTLSLILS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTKKNK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA