Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is 170024631
Identifier: 170024631
GI number: 170024631
Start: 2637336
End: 2637935
Strand: Direct
Name: 170024631
Synonym: YPK_2406
Alternate gene names: NA
Gene position: 2637336-2637935 (Clockwise)
Preceding gene: 170024630
Following gene: 170024639
Centisome position: 56.24
GC content: 32.17
Gene sequence:
>600_bases ATGTACTTATCAAAACCAAGTATCATATATGGTTTCCATGGAATGGATGAAGATGCAGCATTACCCATTCTATTAAAAAA AGACAACTTCAAACACAGTAATAATTCATATGATTGGCTTGGCAATGGTGTTTATTTTTGGGAAAACAATTATGAAAGAG CCATTCAATATGCTATTGAAGATAAAGCAAGAAAAAACTCGAGAATAAAAAAACCATTTGTATTAGGCGCTATTATTGAC CTTGGTAATTGTTTAGACTTATTTGATCAAAAGCATATTGATTTTCTGAAATTCTCATTTGAAGAAATGCTTGGATCATT AAATTCGCAAAAGAAAGAAATACCGGTGAATAAAAAATTTGGTAACAGCGATTTTGATTTTAGATGTAGAGAATTAGATT GTGCGGTTATTCGATATGCCCACACTCTTGCAAAAAAAGAAGGAAAACCATTCGACTCTGTTAGAGCCGCTTTTTTAGAA GGTAATCCTTTGTATGAAGGCGCTAAATTTTATGAAAAAAACCATATCCAAATCGCTGTACTAAATCCCAACTGTATTAA AGGGGTCTTTTACCCAAGGGAAAAAGTAGTTTACCCTTAA
Upstream 100 bases:
>100_bases TGTTGAGTCAAAAATATTAACAAAAAATGGAACTTACAATTCTCGTTTTTTTACAAAAGAAACTGTTGAAAAAAGTAAAC CCAAGGAATAGGGATGTAGA
Downstream 100 bases:
>100_bases TCAAGATAAAAAAAACCGAGCTATCCCAATGACCCGAACGATAGACCGTCATTGGGATCCGAGGGTTAAGTCTCTTGGGC AATGGGTAAGGTTTCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MYLSKPSIIYGFHGMDEDAALPILLKKDNFKHSNNSYDWLGNGVYFWENNYERAIQYAIEDKARKNSRIKKPFVLGAIID LGNCLDLFDQKHIDFLKFSFEEMLGSLNSQKKEIPVNKKFGNSDFDFRCRELDCAVIRYAHTLAKKEGKPFDSVRAAFLE GNPLYEGAKFYEKNHIQIAVLNPNCIKGVFYPREKVVYP
Sequences:
>Translated_199_residues MYLSKPSIIYGFHGMDEDAALPILLKKDNFKHSNNSYDWLGNGVYFWENNYERAIQYAIEDKARKNSRIKKPFVLGAIID LGNCLDLFDQKHIDFLKFSFEEMLGSLNSQKKEIPVNKKFGNSDFDFRCRELDCAVIRYAHTLAKKEGKPFDSVRAAFLE GNPLYEGAKFYEKNHIQIAVLNPNCIKGVFYPREKVVYP >Mature_199_residues MYLSKPSIIYGFHGMDEDAALPILLKKDNFKHSNNSYDWLGNGVYFWENNYERAIQYAIEDKARKNSRIKKPFVLGAIID LGNCLDLFDQKHIDFLKFSFEEMLGSLNSQKKEIPVNKKFGNSDFDFRCRELDCAVIRYAHTLAKKEGKPFDSVRAAFLE GNPLYEGAKFYEKNHIQIAVLNPNCIKGVFYPREKVVYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23080; Mature: 23080
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLSKPSIIYGFHGMDEDAALPILLKKDNFKHSNNSYDWLGNGVYFWENNYERAIQYAIE CCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH DKARKNSRIKKPFVLGAIIDLGNCLDLFDQKHIDFLKFSFEEMLGSLNSQKKEIPVNKKF HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC GNSDFDFRCRELDCAVIRYAHTLAKKEGKPFDSVRAAFLEGNPLYEGAKFYEKNHIQIAV CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHEECCCEEEEE LNPNCIKGVFYPREKVVYP ECCCCEECEECCCCCCCCC >Mature Secondary Structure MYLSKPSIIYGFHGMDEDAALPILLKKDNFKHSNNSYDWLGNGVYFWENNYERAIQYAIE CCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH DKARKNSRIKKPFVLGAIIDLGNCLDLFDQKHIDFLKFSFEEMLGSLNSQKKEIPVNKKF HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC GNSDFDFRCRELDCAVIRYAHTLAKKEGKPFDSVRAAFLEGNPLYEGAKFYEKNHIQIAV CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHEECCCEEEEE LNPNCIKGVFYPREKVVYP ECCCCEECEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA