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The map label for this gene is fliH [H]

Identifier: 170024618

GI number: 170024618

Start: 2628184

End: 2628900

Strand: Direct

Name: fliH [H]

Synonym: YPK_2393

Alternate gene names: 170024618

Gene position: 2628184-2628900 (Clockwise)

Preceding gene: 170024617

Following gene: 170024619

Centisome position: 56.04

GC content: 54.81

Gene sequence:

>717_bases
ATGTCTGATCGGATTAACGCCCTGCCCTGGCAACCTTGGTCCCTGAAAGATTTTGCCAGCCAATCCGAGGTACCACTGTC
CGAGTCTATGCCGGATATCAGTCTGTTATTTCCTAATGAACCGATGGAAGCCACAGCCGCCGTTGATGAGCAACAGGTGT
TGGTAAACCTGCAATTGGAAGCCGAGAAGCAGGGCCGCCAGCAGGGGTTTGCCAAAGGCTTGCAAGAAGGGTTGGATAAG
GGTTACCAAACCGGGCTGGAAGAAGGCCACCAGCAAGCGCTGGCCGATGCGCAGCAGCAATTGGCACCAATGACCGCCCA
CTGGCAAGTTATGGTGACCGATTTTCAAAATACGCTCGATACCTTGGATAGCGTCATCGCCTCACGCCTAGTACAAATAG
CGCTGGCCGCGGCGAAACAAATTATCGGACAACCCGCGATTTGTGATGGTACGGCCCTCTTGGCGCAAATCCAGCAGATG
ATCCAGCAAGAACCGATGTTTGCGGGCAAAACGCAATTACGGGTAAATCCAGATGATTTAGCCATTGTTGAACAGCGGTT
AGGTTCCACGCTGAGCTTGCACGGCTGGCGCTTATTGGGCGACAGCCAGATTCATGCTGGCGGCTGTAAAGTCAGCGCGG
AAGAAGGCGATTTGGATGCCAGTCTGGCGACCCGTTGGCATGAACTGTGCCGTCTGGCCGCGCCGGGGGAACTGTGA

Upstream 100 bases:

>100_bases
CGGATGTCACTGGTCGAAAACGAACAGAAATCCATCTTGCTTATCGTGCGTCGTTTGGCCGAAAGCGGCGAAATTGTGAT
TGGTGGCGGCGAGGATATCT

Downstream 100 bases:

>100_bases
TGCCCCCCCGCCTCAGCCGCTGGCTTACCTCTTTAGATAAATTCGAAGAGCGTATCAGCCAAACGACAACAATCCGCCGT
TATGGCCGCTTGACCCGCGC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSDRINALPWQPWSLKDFASQSEVPLSESMPDISLLFPNEPMEATAAVDEQQVLVNLQLEAEKQGRQQGFAKGLQEGLDK
GYQTGLEEGHQQALADAQQQLAPMTAHWQVMVTDFQNTLDTLDSVIASRLVQIALAAAKQIIGQPAICDGTALLAQIQQM
IQQEPMFAGKTQLRVNPDDLAIVEQRLGSTLSLHGWRLLGDSQIHAGGCKVSAEEGDLDASLATRWHELCRLAAPGEL

Sequences:

>Translated_238_residues
MSDRINALPWQPWSLKDFASQSEVPLSESMPDISLLFPNEPMEATAAVDEQQVLVNLQLEAEKQGRQQGFAKGLQEGLDK
GYQTGLEEGHQQALADAQQQLAPMTAHWQVMVTDFQNTLDTLDSVIASRLVQIALAAAKQIIGQPAICDGTALLAQIQQM
IQQEPMFAGKTQLRVNPDDLAIVEQRLGSTLSLHGWRLLGDSQIHAGGCKVSAEEGDLDASLATRWHELCRLAAPGEL
>Mature_237_residues
SDRINALPWQPWSLKDFASQSEVPLSESMPDISLLFPNEPMEATAAVDEQQVLVNLQLEAEKQGRQQGFAKGLQEGLDKG
YQTGLEEGHQQALADAQQQLAPMTAHWQVMVTDFQNTLDTLDSVIASRLVQIALAAAKQIIGQPAICDGTALLAQIQQMI
QQEPMFAGKTQLRVNPDDLAIVEQRLGSTLSLHGWRLLGDSQIHAGGCKVSAEEGDLDASLATRWHELCRLAAPGEL

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=236, Percent_Identity=55.5084745762712, Blast_Score=217, Evalue=5e-58,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25961; Mature: 25829

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRINALPWQPWSLKDFASQSEVPLSESMPDISLLFPNEPMEATAAVDEQQVLVNLQLE
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCEEEEEEEEC
AEKQGRQQGFAKGLQEGLDKGYQTGLEEGHQQALADAQQQLAPMTAHWQVMVTDFQNTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHH
TLDSVIASRLVQIALAAAKQIIGQPAICDGTALLAQIQQMIQQEPMFAGKTQLRVNPDDL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHH
AIVEQRLGSTLSLHGWRLLGDSQIHAGGCKVSAEEGDLDASLATRWHELCRLAAPGEL
HHHHHHHCCEEEECCEEEECCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SDRINALPWQPWSLKDFASQSEVPLSESMPDISLLFPNEPMEATAAVDEQQVLVNLQLE
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCEEEEEEEEC
AEKQGRQQGFAKGLQEGLDKGYQTGLEEGHQQALADAQQQLAPMTAHWQVMVTDFQNTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHH
TLDSVIASRLVQIALAAAKQIIGQPAICDGTALLAQIQQMIQQEPMFAGKTQLRVNPDDL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHH
AIVEQRLGSTLSLHGWRLLGDSQIHAGGCKVSAEEGDLDASLATRWHELCRLAAPGEL
HHHHHHHCCEEEECCEEEECCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1646201; 11677609; 2656645 [H]