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The map label for this gene is fliF [H]

Identifier: 170024616

GI number: 170024616

Start: 2625490

End: 2627202

Strand: Direct

Name: fliF [H]

Synonym: YPK_2391

Alternate gene names: 170024616

Gene position: 2625490-2627202 (Clockwise)

Preceding gene: 170024612

Following gene: 170024617

Centisome position: 55.99

GC content: 53.47

Gene sequence:

>1713_bases
ATGAATGCCTCGATAACTGGCGGTGAAAATCGTGAGAACACTTTTACGATGACACTGGCACGCCTACGCGCGAACCCCAA
AATCCCCCTGCTGATTGCTGCGGCTGCTGCTATCGCTATCATTGTCGCCTTGATGCTCTGGGCTAAAAGCCCGGATTATC
GCGTCCTTTACAGCAATCTCAGTGATCGTGACGGCGGTGATATCGTCACCCAACTGACACAACTGAACATCCCTTATCGT
TTCGCTGATAATGGTGGCGCATTGCTGATCCCCGCTGAGAAAGTGCATGAAACTCGCTTGCGGCTGGCACAACAGGGTTT
ACCGAAAGGTGGCGCTGTGGGTTTTGAATTACTGGATCAGGAAAAATTCGGCATCAGTCAATTCAGTGAGCAGATAAACT
ACCAGCGGGCATTGGAAGGTGAATTATCCCGGACCATCGGCACACTCGGGCCAGTATTGAATGTACGAGTGCATTTGGCG
ATGCCCAAACCCTCGTTATTTGTCCGTGAACAAAAATCCCCGACCGCCTCGGTCACCCTCGCCTTACAACCAGGTCGCGC
ATTAGATGATGGCCAGATCAATGCCATCGTTTATATGGTTTCCAGTAGCGTGGCAGGCTTGCCGCCGGGTAACGTCACCG
TGGTTGACCAAACGGGCCGTCTGTTGACGCAATCAGACAGTGCAGGCCGCGATTTAAATGCTTCGCAATTGAAATTCACC
AGCGAAGTCGAAAACCGTTATCAGCGCCGTATTGAAAATATTCTGGCACCGATGGTCGGCAACGGTAATGTTCATGCTCA
GGTGACTGCGCAGGTTGATTTTGCCAGCCGTGAACAAACGGATGAAGAGTACAAACCGAATCAGGCCGCCAACCAAGGTG
CTGTCCGCTCTCAACAGGTGAGTACCAGCGAACAACTGGGCGGAACCAACGTAGGCGGTGTGCCGGGGGCGTTATCGAAC
CAACCGCCAGTGGCACCGATAGCCCCGATTGAAATCCCACAACCGGCAGGGGCCGCCGCCAATAATGCCGCTCCGGCTAA
TGCGGCGGCAACGGCTAACGCAAATACGACAGCAACCGCCGCGAAAGCCAGTTCCAGCAATAGTCGCCATGACCAAACGA
CAAACTTCGAAGTTGACCGCACCATCCGCCATACCCAGCAGCAAGCAGGTATGGTGCAGCGTTTATCCGTCGCGGTGGTG
GTGAACTACACCAGCGATAAAGCCGGTAAACCGATTGCACTGAGTAAAGATCAGTTGGCGCAGGTGGAGTCACTGACCCG
TGAGGCGATGGGTTTCTCTACCGTCCGTGGTGACACACTGAACGTAGTCAATACCCCCTTCACAGCCAGTGACGATACCC
GTGGCAGCAGCCTACCGTTTTGGCAACAGCAATCCTTCTTTGATCAGTTGCTGAATGCCGGCCGCTACCTGCTGATCCTA
CTGGTTGCCTGGATTTTGTGGCGCAAACTACTTCGCCCAATGCTCGCCAAAAAACAGGTTGCAGATAAAGCGGCCGCCTC
GGTCAATAACATCGTTCAAACCGCACAAGCGGCTGAGACAGTAAAACAAAGTAAAGAAGAGCTGGCCCTGCGTAAGAAGA
ATCAGCAGCGGGTGAGTGCTGAAGTTCAGGCCCAGCGTATACGCGAACTGGCGGATAAAGACCCACGTGTTGTGGCGTTG
GTGATCCGTCAATGGATGAGTAATGACCAATGA

Upstream 100 bases:

>100_bases
GCGGTACCGCTCACAGCACCTGGGAGTCTGTTTTGTTTCAGCACACTATTTATATGAAGAATATTAATTCAAACGTTGTT
CAGCTTGGGCAAGGACGTGT

Downstream 100 bases:

>100_bases
GCCTGACCGGAACTGAAAAGAGCGCCATTATGCTAATGACGTTGGGTGAAGACCACGCCGCAGAGGTTTTCAAGCACCTC
TCCTCCCGTGAGGTGCAGCA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MNASITGGENRENTFTMTLARLRANPKIPLLIAAAAAIAIIVALMLWAKSPDYRVLYSNLSDRDGGDIVTQLTQLNIPYR
FADNGGALLIPAEKVHETRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQINYQRALEGELSRTIGTLGPVLNVRVHLA
MPKPSLFVREQKSPTASVTLALQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQTGRLLTQSDSAGRDLNASQLKFT
SEVENRYQRRIENILAPMVGNGNVHAQVTAQVDFASREQTDEEYKPNQAANQGAVRSQQVSTSEQLGGTNVGGVPGALSN
QPPVAPIAPIEIPQPAGAAANNAAPANAAATANANTTATAAKASSSNSRHDQTTNFEVDRTIRHTQQQAGMVQRLSVAVV
VNYTSDKAGKPIALSKDQLAQVESLTREAMGFSTVRGDTLNVVNTPFTASDDTRGSSLPFWQQQSFFDQLLNAGRYLLIL
LVAWILWRKLLRPMLAKKQVADKAAASVNNIVQTAQAAETVKQSKEELALRKKNQQRVSAEVQAQRIRELADKDPRVVAL
VIRQWMSNDQ

Sequences:

>Translated_570_residues
MNASITGGENRENTFTMTLARLRANPKIPLLIAAAAAIAIIVALMLWAKSPDYRVLYSNLSDRDGGDIVTQLTQLNIPYR
FADNGGALLIPAEKVHETRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQINYQRALEGELSRTIGTLGPVLNVRVHLA
MPKPSLFVREQKSPTASVTLALQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQTGRLLTQSDSAGRDLNASQLKFT
SEVENRYQRRIENILAPMVGNGNVHAQVTAQVDFASREQTDEEYKPNQAANQGAVRSQQVSTSEQLGGTNVGGVPGALSN
QPPVAPIAPIEIPQPAGAAANNAAPANAAATANANTTATAAKASSSNSRHDQTTNFEVDRTIRHTQQQAGMVQRLSVAVV
VNYTSDKAGKPIALSKDQLAQVESLTREAMGFSTVRGDTLNVVNTPFTASDDTRGSSLPFWQQQSFFDQLLNAGRYLLIL
LVAWILWRKLLRPMLAKKQVADKAAASVNNIVQTAQAAETVKQSKEELALRKKNQQRVSAEVQAQRIRELADKDPRVVAL
VIRQWMSNDQ
>Mature_570_residues
MNASITGGENRENTFTMTLARLRANPKIPLLIAAAAAIAIIVALMLWAKSPDYRVLYSNLSDRDGGDIVTQLTQLNIPYR
FADNGGALLIPAEKVHETRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQINYQRALEGELSRTIGTLGPVLNVRVHLA
MPKPSLFVREQKSPTASVTLALQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQTGRLLTQSDSAGRDLNASQLKFT
SEVENRYQRRIENILAPMVGNGNVHAQVTAQVDFASREQTDEEYKPNQAANQGAVRSQQVSTSEQLGGTNVGGVPGALSN
QPPVAPIAPIEIPQPAGAAANNAAPANAAATANANTTATAAKASSSNSRHDQTTNFEVDRTIRHTQQQAGMVQRLSVAVV
VNYTSDKAGKPIALSKDQLAQVESLTREAMGFSTVRGDTLNVVNTPFTASDDTRGSSLPFWQQQSFFDQLLNAGRYLLIL
LVAWILWRKLLRPMLAKKQVADKAAASVNNIVQTAQAAETVKQSKEELALRKKNQQRVSAEVQAQRIRELADKDPRVVAL
VIRQWMSNDQ

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=552, Percent_Identity=63.9492753623188, Blast_Score=688, Evalue=0.0,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61594; Mature: 61594

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASITGGENRENTFTMTLARLRANPKIPLLIAAAAAIAIIVALMLWAKSPDYRVLYSNL
CCCCCCCCCCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
SDRDGGDIVTQLTQLNIPYRFADNGGALLIPAEKVHETRLRLAQQGLPKGGAVGFELLDQ
CCCCCHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
EKFGISQFSEQINYQRALEGELSRTIGTLGPVLNVRVHLAMPKPSLFVREQKSPTASVTL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECCCCCEEEEE
ALQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQTGRLLTQSDSAGRDLNASQLKFT
EECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHH
SEVENRYQRRIENILAPMVGNGNVHAQVTAQVDFASREQTDEEYKPNQAANQGAVRSQQV
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCHHCCCCCHHCCCCCHHHHC
STSEQLGGTNVGGVPGALSNQPPVAPIAPIEIPQPAGAAANNAAPANAAATANANTTATA
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AKASSSNSRHDQTTNFEVDRTIRHTQQQAGMVQRLSVAVVVNYTSDKAGKPIALSKDQLA
HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCEEECHHHHH
QVESLTREAMGFSTVRGDTLNVVNTPFTASDDTRGSSLPFWQQQSFFDQLLNAGRYLLIL
HHHHHHHHHHCCHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
LVAWILWRKLLRPMLAKKQVADKAAASVNNIVQTAQAAETVKQSKEELALRKKNQQRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVQAQRIRELADKDPRVVALVIRQWMSNDQ
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNASITGGENRENTFTMTLARLRANPKIPLLIAAAAAIAIIVALMLWAKSPDYRVLYSNL
CCCCCCCCCCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
SDRDGGDIVTQLTQLNIPYRFADNGGALLIPAEKVHETRLRLAQQGLPKGGAVGFELLDQ
CCCCCHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
EKFGISQFSEQINYQRALEGELSRTIGTLGPVLNVRVHLAMPKPSLFVREQKSPTASVTL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECCCCCEEEEE
ALQPGRALDDGQINAIVYMVSSSVAGLPPGNVTVVDQTGRLLTQSDSAGRDLNASQLKFT
EECCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHH
SEVENRYQRRIENILAPMVGNGNVHAQVTAQVDFASREQTDEEYKPNQAANQGAVRSQQV
HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCHHCCCCCHHCCCCCHHHHC
STSEQLGGTNVGGVPGALSNQPPVAPIAPIEIPQPAGAAANNAAPANAAATANANTTATA
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AKASSSNSRHDQTTNFEVDRTIRHTQQQAGMVQRLSVAVVVNYTSDKAGKPIALSKDQLA
HHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCEEECHHHHH
QVESLTREAMGFSTVRGDTLNVVNTPFTASDDTRGSSLPFWQQQSFFDQLLNAGRYLLIL
HHHHHHHHHHCCHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
LVAWILWRKLLRPMLAKKQVADKAAASVNNIVQTAQAAETVKQSKEELALRKKNQQRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVQAQRIRELADKDPRVVALVIRQWMSNDQ
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2544561; 11677609; 1551848 [H]