| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024559
Identifier: 170024559
GI number: 170024559
Start: 2572098
End: 2572493
Strand: Direct
Name: 170024559
Synonym: YPK_2334
Alternate gene names: NA
Gene position: 2572098-2572493 (Clockwise)
Preceding gene: 170024558
Following gene: 170024560
Centisome position: 54.85
GC content: 52.27
Gene sequence:
>396_bases ATGTTAACCAATAAATTTATTCTCGGCAAAGCCAGCGAAAGTAATCTGATCGGCGTACATCCTGATTTGGTTAAAGTGGT GCGCCGCGCGCTGGAACTGACTCCGCTTGATTTTAAAGTGATTGAGGGCTGTCGCACGCTGGAACGCCAGCGCGAACTGG TCAAAGTCGGAGCCAGTCAAACCCTGAACAGCCGCCACTTAACCGGCCATGCGGTAGATATTGTGCCGCTGCCAGACGGT AAGATCAGTTGGGAGTGGAAATATTTTTATCCAATGGCTGACGCAATGAAACGGGCCGCCGCCGAGCTGAAGATCGCCGT GGAATGGGGCGGTAACTGGACCACCTTTAAAGACGGCCCACATTTTCAATTGCCCGCCCGTCAATATCCGAGTTGA
Upstream 100 bases:
>100_bases AAAATAGAAATTTTTATCAGTTGTTTGATCGGTCTGATTGGCTTGCAGGCTATCCGCGAGCTGGTATTCAAAATCATCAA TAAAAAGGCAGGAACCACTG
Downstream 100 bases:
>100_bases CACCATGCCACTCTTCAACACCGCTCCGCTCGCATGGGCGATTGCCGCCTTACTGCTTGCCGGTGGCGTACAGACTTACC GCTTGTCTGAGGCTCGGCAA
Product: bacteriophage P7-like protein
Products: NA
Alternate protein names: Phage Endolysin; Phage-Related Protein; Bacteriophage P7 Related Protein; Phagelysin; Phage Protein; Lysozyme; Phage Capsid Scaffolding Protein; Peptidase; L-Alanyl-D-Glutamate Peptidase
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDIVPLPDG KISWEWKYFYPMADAMKRAAAELKIAVEWGGNWTTFKDGPHFQLPARQYPS
Sequences:
>Translated_131_residues MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDIVPLPDG KISWEWKYFYPMADAMKRAAAELKIAVEWGGNWTTFKDGPHFQLPARQYPS >Mature_131_residues MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQTLNSRHLTGHAVDIVPLPDG KISWEWKYFYPMADAMKRAAAELKIAVEWGGNWTTFKDGPHFQLPARQYPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14814; Mature: 14814
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQ CCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC TLNSRHLTGHAVDIVPLPDGKISWEWKYFYPMADAMKRAAAELKIAVEWGGNWTTFKDGP CCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHEEEEEEECCCEEECCCCC HFQLPARQYPS CEECCCCCCCC >Mature Secondary Structure MLTNKFILGKASESNLIGVHPDLVKVVRRALELTPLDFKVIEGCRTLERQRELVKVGASQ CCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC TLNSRHLTGHAVDIVPLPDGKISWEWKYFYPMADAMKRAAAELKIAVEWGGNWTTFKDGP CCCCCCCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHEEEEEEECCCEEECCCCC HFQLPARQYPS CEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA