| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024558
Identifier: 170024558
GI number: 170024558
Start: 2571725
End: 2572111
Strand: Direct
Name: 170024558
Synonym: YPK_2333
Alternate gene names: NA
Gene position: 2571725-2572111 (Clockwise)
Preceding gene: 170024557
Following gene: 170024559
Centisome position: 54.84
GC content: 48.32
Gene sequence:
>387_bases ATGAAAATGCCAGACAAAGATCCGGGTTGGATGGGTGCATTACTGGCCTTTTACTCTGCCTACTCAACCGCGATAAACGG TTTTCTTATCGCTTTTATTGTGGCATTTCGCCGCGTGGTATGGGGCGGCGGTAAGTTACGTGAAGGGATTGGCGAGGGGG TCGTATGTGGGCTGGTCGGTGTCAATATCGGTCCGGTCATTTCCCCTGTGTTGATCCGCATGATTGATGCTATTCCCTGG CTAAACGGCGCATTAACCGAGGTCGCCGCTGGGAAAATAGAAATTTTTATCAGTTGTTTGATCGGTCTGATTGGCTTGCA GGCTATCCGCGAGCTGGTATTCAAAATCATCAATAAAAAGGCAGGAACCACTGATGTTAACCAATAA
Upstream 100 bases:
>100_bases ACGGTTACCCGGTGGAAATGCCAGAAGTCGCCGCCGCCATCACTGCGCAAACCGTGCAACTTTGGGACTAACTACACAAT CCCCATAGGGGGTAACGGAT
Downstream 100 bases:
>100_bases ATTTATTCTCGGCAAAGCCAGCGAAAGTAATCTGATCGGCGTACATCCTGATTTGGTTAAAGTGGTGCGCCGCGCGCTGG AACTGACTCCGCTTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKMPDKDPGWMGALLAFYSAYSTAINGFLIAFIVAFRRVVWGGGKLREGIGEGVVCGLVGVNIGPVISPVLIRMIDAIPW LNGALTEVAAGKIEIFISCLIGLIGLQAIRELVFKIINKKAGTTDVNQ
Sequences:
>Translated_128_residues MKMPDKDPGWMGALLAFYSAYSTAINGFLIAFIVAFRRVVWGGGKLREGIGEGVVCGLVGVNIGPVISPVLIRMIDAIPW LNGALTEVAAGKIEIFISCLIGLIGLQAIRELVFKIINKKAGTTDVNQ >Mature_128_residues MKMPDKDPGWMGALLAFYSAYSTAINGFLIAFIVAFRRVVWGGGKLREGIGEGVVCGLVGVNIGPVISPVLIRMIDAIPW LNGALTEVAAGKIEIFISCLIGLIGLQAIRELVFKIINKKAGTTDVNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13661; Mature: 13661
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPDKDPGWMGALLAFYSAYSTAINGFLIAFIVAFRRVVWGGGKLREGIGEGVVCGLVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH VNIGPVISPVLIRMIDAIPWLNGALTEVAAGKIEIFISCLIGLIGLQAIRELVFKIINKK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGTTDVNQ CCCCCCCC >Mature Secondary Structure MKMPDKDPGWMGALLAFYSAYSTAINGFLIAFIVAFRRVVWGGGKLREGIGEGVVCGLVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH VNIGPVISPVLIRMIDAIPWLNGALTEVAAGKIEIFISCLIGLIGLQAIRELVFKIINKK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGTTDVNQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA