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The map label for this gene is yeiE [H]

Identifier: 170024488

GI number: 170024488

Start: 2510448

End: 2511392

Strand: Reverse

Name: yeiE [H]

Synonym: YPK_2259

Alternate gene names: 170024488

Gene position: 2511392-2510448 (Counterclockwise)

Preceding gene: 170024492

Following gene: 170024486

Centisome position: 53.55

GC content: 50.69

Gene sequence:

>945_bases
ATGACACTGAAACAGCTTGAGGCCTTTTATTGGGCGGCCAGATGTTCTAATTTTTCCATTGCTGCTGAGCGGCTGCATAT
TTCTATCTCTTCCTTATCCAAGCGAATAGTCGAGCTGGAAGCGTCACTGGGGTGTACTCTTTTTGACCGCTCTGGATACC
GGGCGGTGTTAACGGAGACCGGTCAGAACCTGCTACCGCGCGCATTTGCATTGTTGGAGTCTGCTGCTGAAATCCGCAAT
ACTCTGGGCGCAAGCGAAGGTTTGTCTGGCATCTGTAATTTTGGCGTTGGAGAGTTGAGCGCTCTGACGTGGCTGCCGAG
TTTTATTGCTTCAGCCCGTTTGCTTTATCCGAAGTTGGTTTTAGCGCCACATGTTGATGTTGGTGCGGCTCTTGAAGGAC
GAGTTAATAAGGGCGAAATGGATTTTGCGATCATTGCGGGGCGTTCTTCTCGGCAGAATATTTTGTCGTTGCCCATTGCT
CAGGCGCAGTTTGTCTGGATGGCATCGCCGACGTTAGCAAATACTGTCGGTACCGCCGACAGTGCGTTACGGCAGGCGCT
TCCTCTGATTACACTCCCGCCAGGAGCGGGTTCTAGCCGGATTATCGACGCTTGGCTCATGGCATATGAAATTGCCTCGG
TGGCCCGTATCAATTGCAACAGTTGGGGGGCCATTGTGGGTATGCTCATTGCGTCAGTCGGCATCGGCATTCTGCCAACA
AGTTGGGCTGAAAAGCTTTCCCTACACAATCAACTGGAATATCTTCCTTGCTCTGAACCTTTAGCAGCATTGAATTACTC
CTTCCAATGGCGGCGTGATGATCCACGCCCACTAATCAGAAAAATGCGTGTGTTGGTTGCCGACCTGGCCGATTTCTCGC
TAAATAGCCCACTGCCACTAAATAATTCACTGCCGCTACATCATTCACTACCACAACGTGATTAA

Upstream 100 bases:

>100_bases
GGTAAAAATAAAATTCAGATTAGAAGGCAATTATTGATATAGAAAGCGAATGTTTTGATATAAATTAATTGACAAAAATA
GAACAAACCAGAACAAGAAT

Downstream 100 bases:

>100_bases
TTTAGTGTGCAAATTCCGCATACATTTAGCTATTAGGTGGTAAGTTGGTCACCTTCAATAATCGCAATCCAAGGATAGAC
ATAAATAGTGTCGTCAACGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTLKQLEAFYWAARCSNFSIAAERLHISISSLSKRIVELEASLGCTLFDRSGYRAVLTETGQNLLPRAFALLESAAEIRN
TLGASEGLSGICNFGVGELSALTWLPSFIASARLLYPKLVLAPHVDVGAALEGRVNKGEMDFAIIAGRSSRQNILSLPIA
QAQFVWMASPTLANTVGTADSALRQALPLITLPPGAGSSRIIDAWLMAYEIASVARINCNSWGAIVGMLIASVGIGILPT
SWAEKLSLHNQLEYLPCSEPLAALNYSFQWRRDDPRPLIRKMRVLVADLADFSLNSPLPLNNSLPLHHSLPQRD

Sequences:

>Translated_314_residues
MTLKQLEAFYWAARCSNFSIAAERLHISISSLSKRIVELEASLGCTLFDRSGYRAVLTETGQNLLPRAFALLESAAEIRN
TLGASEGLSGICNFGVGELSALTWLPSFIASARLLYPKLVLAPHVDVGAALEGRVNKGEMDFAIIAGRSSRQNILSLPIA
QAQFVWMASPTLANTVGTADSALRQALPLITLPPGAGSSRIIDAWLMAYEIASVARINCNSWGAIVGMLIASVGIGILPT
SWAEKLSLHNQLEYLPCSEPLAALNYSFQWRRDDPRPLIRKMRVLVADLADFSLNSPLPLNNSLPLHHSLPQRD
>Mature_313_residues
TLKQLEAFYWAARCSNFSIAAERLHISISSLSKRIVELEASLGCTLFDRSGYRAVLTETGQNLLPRAFALLESAAEIRNT
LGASEGLSGICNFGVGELSALTWLPSFIASARLLYPKLVLAPHVDVGAALEGRVNKGEMDFAIIAGRSSRQNILSLPIAQ
AQFVWMASPTLANTVGTADSALRQALPLITLPPGAGSSRIIDAWLMAYEIASVARINCNSWGAIVGMLIASVGIGILPTS
WAEKLSLHNQLEYLPCSEPLAALNYSFQWRRDDPRPLIRKMRVLVADLADFSLNSPLPLNNSLPLHHSLPQRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=215, Percent_Identity=31.6279069767442, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787806, Length=279, Percent_Identity=25.8064516129032, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788748, Length=247, Percent_Identity=28.7449392712551, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790208, Length=244, Percent_Identity=25.4098360655738, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34078; Mature: 33947

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKQLEAFYWAARCSNFSIAAERLHISISSLSKRIVELEASLGCTLFDRSGYRAVLTET
CCHHHHHHHHHHHHCCCCCEEHHHHEEEHHHHHHHHHHHHHHCCEEEEECCCCEEEEECC
GQNLLPRAFALLESAAEIRNTLGASEGLSGICNFGVGELSALTWLPSFIASARLLYPKLV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAPHVDVGAALEGRVNKGEMDFAIIAGRSSRQNILSLPIAQAQFVWMASPTLANTVGTAD
CCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHCCCCCCEEEEEEECCHHHHHHCCHH
SALRQALPLITLPPGAGSSRIIDAWLMAYEIASVARINCNSWGAIVGMLIASVGIGILPT
HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCC
SWAEKLSLHNQLEYLPCSEPLAALNYSFQWRRDDPRPLIRKMRVLVADLADFSLNSPLPL
HHHHHHHHHHHCCCCCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
NNSLPLHHSLPQRD
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKQLEAFYWAARCSNFSIAAERLHISISSLSKRIVELEASLGCTLFDRSGYRAVLTET
CHHHHHHHHHHHHCCCCCEEHHHHEEEHHHHHHHHHHHHHHCCEEEEECCCCEEEEECC
GQNLLPRAFALLESAAEIRNTLGASEGLSGICNFGVGELSALTWLPSFIASARLLYPKLV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAPHVDVGAALEGRVNKGEMDFAIIAGRSSRQNILSLPIAQAQFVWMASPTLANTVGTAD
CCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHCCCCCCEEEEEEECCHHHHHHCCHH
SALRQALPLITLPPGAGSSRIIDAWLMAYEIASVARINCNSWGAIVGMLIASVGIGILPT
HHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCC
SWAEKLSLHNQLEYLPCSEPLAALNYSFQWRRDDPRPLIRKMRVLVADLADFSLNSPLPL
HHHHHHHHHHHCCCCCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
NNSLPLHHSLPQRD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]