| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024443
Identifier: 170024443
GI number: 170024443
Start: 2452382
End: 2453668
Strand: Reverse
Name: 170024443
Synonym: YPK_2214
Alternate gene names: NA
Gene position: 2453668-2452382 (Counterclockwise)
Preceding gene: 170024444
Following gene: 170024442
Centisome position: 52.32
GC content: 52.29
Gene sequence:
>1287_bases ATGATCCCGTTTATGACGCTCTGGCACTATTTTCGTATCCGACGCCTGCACTTTGCCAACCGTAAAACGCTTGAAGCTTA TCAGGTCAAAAAACTTCAGCAATTTTCTCAACAGGTATTGGCTAATAGCCCTTGGTTCAGACGCTACGCCTCACAGCCGA TCACGGCGTGGCCACTGATGGATAAGCAACTGATGATGGAACATTTTGATGTGATGAACACGCAGGGTCTACACCGTGAC GTGCTGATGGCATGTGCGCTTGGCAGTGAGCAAGATCGCGATTTTTCACGTCAAACCGGGAAGTTCAGCGTTGGGTTATC ATCTGGCACCTCGGGCCAACGTGGTCTCTTTGTGGTCAGCCCTCAAGAACAGCAACTCTGGGCGGGGGGCATTCTGGCTA AAATGTTGCCCGATGGCGTATTCGCGGGTGAGCGTGTGGCGCTATTTCTGCGGGCGGATAATAACCTTTACCAAAGTGTT AACAACCGTTGGTTGAGTTTGGCGTTCTACGATCTTTTTCAGCCTTTTCAGTCTCACGCAGGTCTTCTGGAACAGCAGTC GCCGACGATTATCGTCGCACCGGCACAGGTGCTACGGGCGTTAGCGTTGGCGGTGATGCGCGGAGAACTGCACCTCACGG TTAAAAAGGTGATTTCTGTCGCCGAGGTGTTGGATGAACAAGATCGTCAACTCCTACAACAGGTTTTTGGTCACGTTGGT GAAGTCTATCAGGCGACAGAAGGCTTCTTAGCTGCCAGTTGTTCCCACGGCACCTTGCACCTGAATGAAGAATTTCTACA CATTGAACCGCAATGGGTCGATGAGCGGCGCTTTACCCCAGTTATCACCGATTTTACGCGACGAACCCAACCTATCGTGC GTTACAAACTGGATGATGTGCTGGTAGTGAGCGATAAGCCCTGTCCTTGTGGCAACCCTGCGCGGGCGATTAGCCATATT GAAGGGCGTTGGGATGACCAGTTACTGCTTCCTGACCCGCAAGGCATATTGCAGGTGATATTTGCCGATCTCTGTAGTCG GGTATTGGCCACCGCGTTACCGCTGACGGCGGATTACCGTCTGATTCAGCGTGGCGACCATCATCTACATTTGATGGCCG ATTGCACGGCTAGCGAACTGGAATGTTGTCGGCGTGCGATGGTATTGATGCTTCAGCAGCAGGGTATTGAGACCGAGAGG TTATGTTGGCAGTTAGAGGCAGTGGCCGTGATCCCACAATTTGATCGCAAAAGGCGGCGTATTATTCGTCAGGGCGTCGC GGGGTGA
Upstream 100 bases:
>100_bases TGATGGCAGACTCGCGTGCTTACTACCAAACGTTACAGCGGCTTAATCACTTATGGCGCACGGGGAAAACAGACATTCGG TTATGCCATGAGGGGGATTT
Downstream 100 bases:
>100_bases AAACAGGGCTATTTCTGGTCCCCATCAAGGCGGTTAGCTGGTTGGTGGTATTGCCCTGGCATGGGGAGCGGGCGTTATAG CGCAGTGGGTAAATGGGCAC
Product: adenylate-forming protein
Products: NA
Alternate protein names: Co Synthetase; AMP-Dependent Synthetase And Ligase
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLMDKQLMMEHFDVMNTQGLHRD VLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSV NNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWVDERRFTPVITDFTRRTQPIVRYKLDDVLVVSDKPCPCGNPARAISHI EGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETER LCWQLEAVAVIPQFDRKRRRIIRQGVAG
Sequences:
>Translated_428_residues MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLMDKQLMMEHFDVMNTQGLHRD VLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSV NNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWVDERRFTPVITDFTRRTQPIVRYKLDDVLVVSDKPCPCGNPARAISHI EGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETER LCWQLEAVAVIPQFDRKRRRIIRQGVAG >Mature_428_residues MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLMDKQLMMEHFDVMNTQGLHRD VLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVSPQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSV NNRWLSLAFYDLFQPFQSHAGLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWVDERRFTPVITDFTRRTQPIVRYKLDDVLVVSDKPCPCGNPARAISHI EGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYRLIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETER LCWQLEAVAVIPQFDRKRRRIIRQGVAG
Specific function: Unknown
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48844; Mature: 48844
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLM CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCC DKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVS CHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEC PQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHA CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHC GLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG CHHCCCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWVDERRFTPVITDFTRRTQPIVRYKLDDV HHHHHHCCCEEECCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCE LVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYR EEECCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH LIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRR HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH IIRQGVAG HHHHCCCC >Mature Secondary Structure MIPFMTLWHYFRIRRLHFANRKTLEAYQVKKLQQFSQQVLANSPWFRRYASQPITAWPLM CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCC DKQLMMEHFDVMNTQGLHRDVLMACALGSEQDRDFSRQTGKFSVGLSSGTSGQRGLFVVS CHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEC PQEQQLWAGGILAKMLPDGVFAGERVALFLRADNNLYQSVNNRWLSLAFYDLFQPFQSHA CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHC GLLEQQSPTIIVAPAQVLRALALAVMRGELHLTVKKVISVAEVLDEQDRQLLQQVFGHVG CHHCCCCCEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYQATEGFLAASCSHGTLHLNEEFLHIEPQWVDERRFTPVITDFTRRTQPIVRYKLDDV HHHHHHCCCEEECCCCCEEEECCCEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCE LVVSDKPCPCGNPARAISHIEGRWDDQLLLPDPQGILQVIFADLCSRVLATALPLTADYR EEECCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH LIQRGDHHLHLMADCTASELECCRRAMVLMLQQQGIETERLCWQLEAVAVIPQFDRKRRR HHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH IIRQGVAG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA