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The map label for this gene is dadA [H]

Identifier: 170024341

GI number: 170024341

Start: 2336546

End: 2337850

Strand: Reverse

Name: dadA [H]

Synonym: YPK_2107

Alternate gene names: 170024341

Gene position: 2337850-2336546 (Counterclockwise)

Preceding gene: 170024343

Following gene: 170024338

Centisome position: 49.85

GC content: 52.64

Gene sequence:

>1305_bases
ATGCGCGTTGTCATTTTAGGAAGTGGTGTGGTGGGTGTCACCAGTGCCTGGTATTTGGCGAAAGAGGGGCATGATGTCAC
GGTTATTGATCGTCAGGATGGCCCCGCCCAGGAAACCAGTGCCGGTAACGCAGGTCAAATCTCACCGGGGTATGCCGCAC
CTTGGGCGGCCCCAGGCGTTCCTCTGAAAGCGATCAAATGGATGTTTCAGCGCCATGCGCCCTTGGCTATCCGTTTGGAT
GGCAGCAGCCTCCAGTTACGTTGGATGTGGCAAATGCTGAGGAATTGCGATACGTCTCACTATATGGTCAACAAAAGCCG
TATGGTCCGTCTGGCGGAGTACAGCCGTGATTGTCTGAAAGACTTACGCGCAGCGACAGGTATTCAATATGAAGGTCGCC
AAGGGGGGACGCTGCAGCTTTTCCGTACCGAACAGCAGTTTGATAACGCGGCGAAAGATATCGCCGTATTGGATGATGCC
GGTGTCCCTTATTCACTGCTGACGGCAGAACAATTAGCCACGGTGGAACCCGCCTTGGCGAAGGTTGCACATAAACTTAC
TGGCGGTTTGCGCTTACCCAATGATGAAACGGGCGACTGTAAATTATTTACTGAGCGGTTGGCAAAAATGGCCGAGCAGG
CTGGGGTGAAATTTATCTTCAATCGCTCGGTCGATAAACTGTTGGTAGAGGGGGACCAAATAGCCGGTGTACTGTGTGGT
GATGACATTATCAAAGCCGATGCCTATGTGGTGGCTTTCGGCGCTTATTCTACCGCGCTACTGGCCGGGCTGGTGTCTAT
CCCGGTTTATCCATTGAAGGGTTACTCGTTGACCATCCCAATTACGGATCCGGCCTCGGCACCTTTTTCAACGGTTCTGG
ATGAAACTTACAAGATTGCTATTACGCGCTTTGATGATCGTATCCGGGTGGGGGGGATGGCTGAAATTGTTGGTTTTAAC
ACGCAACTGGCACCTGCCCGGCGTGAAACGTTGGAAATGGTCGTCCGTGATCTGTATCCCCATGGTGGTGATATCAGCCA
GGCGGTATTCTGGTCCGGTCTGCGACCAATGACACCCGATGGCACTCCAATCGTTGGCCGGACACCGCTGAAAAACCTCT
ATCTTAATACGGGTCACGGCACATTGGGGTGGACGATGGCATGCGGCTCGGGTCAATTATTGGCTGATATAATACAAGGT
CGTCGCCCAGCCATTGTGGCTGATGATTTATCGGTAGCGCGTTACCGCACAGGTTTTCAGCCACTGAATATTGCCCCGTT
ACACGATATTCACCCCATCCGTTAA

Upstream 100 bases:

>100_bases
GGTCACAATCTATAATTAATATGTTGGCTAGTTTTTTCCACTGGGTTAGTTTTCTGTCAACAGAATATTATGCTTTATAC
GTGTTTTAGGTGAGGGTGAT

Downstream 100 bases:

>100_bases
TATCGTGTAACGCGATTATTTGCCGTTGTTAGTGTATTTCTTCCAACTTGCCGCGGACATGTTTACTGGCTCGGCGCGCT
TGCCACGCCAGTAAACAGCC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRVVILGSGVVGVTSAWYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAIRLD
GSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKDLRAATGIQYEGRQGGTLQLFRTEQQFDNAAKDIAVLDDA
GVPYSLLTAEQLATVEPALAKVAHKLTGGLRLPNDETGDCKLFTERLAKMAEQAGVKFIFNRSVDKLLVEGDQIAGVLCG
DDIIKADAYVVAFGAYSTALLAGLVSIPVYPLKGYSLTIPITDPASAPFSTVLDETYKIAITRFDDRIRVGGMAEIVGFN
TQLAPARRETLEMVVRDLYPHGGDISQAVFWSGLRPMTPDGTPIVGRTPLKNLYLNTGHGTLGWTMACGSGQLLADIIQG
RRPAIVADDLSVARYRTGFQPLNIAPLHDIHPIR

Sequences:

>Translated_434_residues
MRVVILGSGVVGVTSAWYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAIRLD
GSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKDLRAATGIQYEGRQGGTLQLFRTEQQFDNAAKDIAVLDDA
GVPYSLLTAEQLATVEPALAKVAHKLTGGLRLPNDETGDCKLFTERLAKMAEQAGVKFIFNRSVDKLLVEGDQIAGVLCG
DDIIKADAYVVAFGAYSTALLAGLVSIPVYPLKGYSLTIPITDPASAPFSTVLDETYKIAITRFDDRIRVGGMAEIVGFN
TQLAPARRETLEMVVRDLYPHGGDISQAVFWSGLRPMTPDGTPIVGRTPLKNLYLNTGHGTLGWTMACGSGQLLADIIQG
RRPAIVADDLSVARYRTGFQPLNIAPLHDIHPIR
>Mature_434_residues
MRVVILGSGVVGVTSAWYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAIRLD
GSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKDLRAATGIQYEGRQGGTLQLFRTEQQFDNAAKDIAVLDDA
GVPYSLLTAEQLATVEPALAKVAHKLTGGLRLPNDETGDCKLFTERLAKMAEQAGVKFIFNRSVDKLLVEGDQIAGVLCG
DDIIKADAYVVAFGAYSTALLAGLVSIPVYPLKGYSLTIPITDPASAPFSTVLDETYKIAITRFDDRIRVGGMAEIVGFN
TQLAPARRETLEMVVRDLYPHGGDISQAVFWSGLRPMTPDGTPIVGRTPLKNLYLNTGHGTLGWTMACGSGQLLADIIQG
RRPAIVADDLSVARYRTGFQPLNIAPLHDIHPIR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=431, Percent_Identity=78.1902552204176, Blast_Score=709, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47235; Mature: 47235

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVTSAWYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGV
CEEEEEECCCHHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHH
DLRAATGIQYEGRQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA
HHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCHHHH
KVAHKLTGGLRLPNDETGDCKLFTERLAKMAEQAGVKFIFNRSVDKLLVEGDQIAGVLCG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCEEEEEEC
DDIIKADAYVVAFGAYSTALLAGLVSIPVYPLKGYSLTIPITDPASAPFSTVLDETYKIA
CCCEECCEEEEEECHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHCCCEEEE
ITRFDDRIRVGGMAEIVGFNTQLAPARRETLEMVVRDLYPHGGDISQAVFWSGLRPMTPD
EEEECCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
GTPIVGRTPLKNLYLNTGHGTLGWTMACGSGQLLADIIQGRRPAIVADDLSVARYRTGFQ
CCEEECCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCHHHHHHCCCC
PLNIAPLHDIHPIR
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVTSAWYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGV
CEEEEEECCCHHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHH
DLRAATGIQYEGRQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA
HHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCHHHH
KVAHKLTGGLRLPNDETGDCKLFTERLAKMAEQAGVKFIFNRSVDKLLVEGDQIAGVLCG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCEEEEEEC
DDIIKADAYVVAFGAYSTALLAGLVSIPVYPLKGYSLTIPITDPASAPFSTVLDETYKIA
CCCEECCEEEEEECHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCHHHHHCCCEEEE
ITRFDDRIRVGGMAEIVGFNTQLAPARRETLEMVVRDLYPHGGDISQAVFWSGLRPMTPD
EEEECCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC
GTPIVGRTPLKNLYLNTGHGTLGWTMACGSGQLLADIIQGRRPAIVADDLSVARYRTGFQ
CCEEECCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCHHHHHHCCCC
PLNIAPLHDIHPIR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA