Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is pagO [H]

Identifier: 170024209

GI number: 170024209

Start: 2189645

End: 2190583

Strand: Reverse

Name: pagO [H]

Synonym: YPK_1972

Alternate gene names: 170024209

Gene position: 2190583-2189645 (Counterclockwise)

Preceding gene: 170024211

Following gene: 170024207

Centisome position: 46.71

GC content: 36.85

Gene sequence:

>939_bases
ATGCGCAAGGTCATAATATCAATGCTATTTATATTGGTTTCTTTAACCTGGGGCACAACATGGTTGGCAATGAGAATTGC
TGTTGAAACAATTCCACCTATATTTGCCACGGGGATGCGCTTTATATTTGCATCGCCTTTTTTAATCTGCATTGCATTGC
TAACCAAAACACCACTTTTATTTCCAACTGGGCAGCGATTTTTTCAATTTATAATCTGTATATTTTATTTCTCTATCCCT
TTTACGTTAATGATTTATGGTGAGACTTATGTTAGTTCAGGTCTTGCCTCAATTATTTTTTCCAATATGCCAGTGGCAGT
ATTAATCGCATCGGTTATCATTTTAAATGAAAAGACTAATTTAATGCAAATCACAGGGTTAACTATTGCAATGGTTTCTC
TGGCAAGTATCCTCCTTGAGGAGTCAAAAACAGGTGTTGGGAGTCATTGGCAGGGGATTCTAGCTCTTGTTTCCGCTGTG
ATTATACATGCGATTGTATATGCGCAATGCAAGAAAAGGTGCTGCACCGTCTCTGTTATCACATTTAATGCACTTCCTTG
TTTTTGGGCGGGTTTAATTCTTGCATTTGCAGGGTATTTTTTTGAGAAGCCACAACTTGCGAATTTCTCAATTAATTCAA
TGCTATCAACTTTTTACCTTGGCGCTTTTGCTGGAGTATTTGGCATTTTGTGCTATTTTCTGCTCCAACAAAAGGCCAAT
GCTTTTCAGGCCTCTCTTGTATTTTTAATATTCCCTCTGATTGCCGTAAGTTTGGAGAGCTATATCTATGGATATGCAAT
TTCATTTTACTCAATGCTGTTGATAATACCTTTAGCTTTTGGAATACTCATTATTCTTATCTCTAAGAACTATTATGCAG
TAAAGAATCAGGGTAGCGTTACACCGGTAGAAATAGAAATGCAGGACTATGATCATTAA

Upstream 100 bases:

>100_bases
AAGAGAAAATAATTCTCCTAAACCATAAAAAATACATGCATAAGAAAATATTTTTCTCATATTAAAGATATATATTGGTT
TCGTCTGTAGGGGAGGATTT

Downstream 100 bases:

>100_bases
CCTTCATTATTTATCTCATCCTAAATTAAAATTTTTCAAAAAATATACAGACCAAGAAAATAAAACCGAGTGAGCACGTA
GATATCATCTACATCTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLLFPTGQRFFQFIICIFYFSIP
FTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTNLMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAV
IIHAIVYAQCKKRCCTVSVITFNALPCFWAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN
AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGSVTPVEIEMQDYDH

Sequences:

>Translated_312_residues
MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLLFPTGQRFFQFIICIFYFSIP
FTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTNLMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAV
IIHAIVYAQCKKRCCTVSVITFNALPCFWAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN
AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGSVTPVEIEMQDYDH
>Mature_312_residues
MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLLFPTGQRFFQFIICIFYFSIP
FTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTNLMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAV
IIHAIVYAQCKKRCCTVSVITFNALPCFWAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN
AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGSVTPVEIEMQDYDH

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34681; Mature: 34681

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FPTGQRFFQFIICIFYFSIPFTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTN
CCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
LMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAVIIHAIVYAQCKKRCCTVSVI
EEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH
TFNALPCFWAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
TPVEIEMQDYDH
CEEEEEECCCCC
>Mature Secondary Structure
MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FPTGQRFFQFIICIFYFSIPFTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTN
CCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
LMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAVIIHAIVYAQCKKRCCTVSVI
EEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH
TFNALPCFWAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN
HHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
TPVEIEMQDYDH
CEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9712687; 11677609 [H]