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The map label for this gene is tnpA [H]

Identifier: 170024207

GI number: 170024207

Start: 2188111

End: 2188371

Strand: Reverse

Name: tnpA [H]

Synonym: YPK_1970

Alternate gene names: 170024207

Gene position: 2188371-2188111 (Counterclockwise)

Preceding gene: 170024209

Following gene: 170024203

Centisome position: 46.67

GC content: 46.74

Gene sequence:

>261_bases
ATGAGTTTTGATAAGAAAAGATGCTACTATCGTTTCACTCAGACCGGCAATAGCTCAAAAATTCATGCTTCAGAACTCAT
TCGCTCACTACTGAAAAGCTCACGGCCGTCAGGGCTGGCTCAGGCTATCATGGAGGTGGGGCGTGTAAACAAGACGCTGT
ATCTTCTTAATTATATTGATGATGAAGATTATCGTCGTCGGATCCTGACGCAACTAAATCGGGGAGAGGGCCGCCATGCA
GTGGCGCGTGCTAAACAATGA

Upstream 100 bases:

>100_bases
ACGTGAGATTTCGTTCCATTGAGCGTCAGACCCCAAGATCAGTAGGTTACTATTCTCAAAATCCATTATCTAAACAGTAT
TCTCTATTATTCCTGCCTAC

Downstream 100 bases:

>100_bases
ATTATCTCCTTAACGTACGTTTTCGTTCCATTGGCCCTCAAACCCCGTAATAGAGCAAAACACCGGCGTTATCGCATCAG
CCCAATCATGACCACAAAGT

Product: TnpA family transposase

Products: NA

Alternate protein names: Transposon Tn1000 transposase [H]

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSFDKKRCYYRFTQTGNSSKIHASELIRSLLKSSRPSGLAQAIMEVGRVNKTLYLLNYIDDEDYRRRILTQLNRGEGRHA
VARAKQ

Sequences:

>Translated_86_residues
MSFDKKRCYYRFTQTGNSSKIHASELIRSLLKSSRPSGLAQAIMEVGRVNKTLYLLNYIDDEDYRRRILTQLNRGEGRHA
VARAKQ
>Mature_85_residues
SFDKKRCYYRFTQTGNSSKIHASELIRSLLKSSRPSGLAQAIMEVGRVNKTLYLLNYIDDEDYRRRILTQLNRGEGRHAV
ARAKQ

Specific function: Required for transposition of transposon Tn1000 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 9993; Mature: 9861

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDKKRCYYRFTQTGNSSKIHASELIRSLLKSSRPSGLAQAIMEVGRVNKTLYLLNYID
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEEEECCC
DEDYRRRILTQLNRGEGRHAVARAKQ
CHHHHHHHHHHHCCCCCCHHHHCCCC
>Mature Secondary Structure 
SFDKKRCYYRFTQTGNSSKIHASELIRSLLKSSRPSGLAQAIMEVGRVNKTLYLLNYID
CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEEEECCC
DEDYRRRILTQLNRGEGRHAVARAKQ
CHHHHHHHHHHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612932; 8080658; 1709493 [H]