| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is gutB [H]
Identifier: 170023851
GI number: 170023851
Start: 1779850
End: 1781076
Strand: Direct
Name: gutB [H]
Synonym: YPK_1610
Alternate gene names: 170023851
Gene position: 1779850-1781076 (Clockwise)
Preceding gene: 170023850
Following gene: 170023852
Centisome position: 37.95
GC content: 46.54
Gene sequence:
>1227_bases ATGATACTCAATGTTTACGTTGTCATTTCAATATTTATTATGAATGCGATGTCATTATTGAGCGTTGAAGTCAGCAATTT TACTTTTGTTGATTTGTTCAAAAATGACAACGTCAACATTGTATCCATACACCGAGTTCTGTTGCTATTGGAGGAGTTAA TGAGTCAGTTACCTGAGAAAATGAGCGCTGTCGTATGTCACGGCCCGCAGGATTATCGTTTAGAACACGTGCCGACACCT GTGCCGAAAGCCAAAGAGTTGGTGATCAAAGTGAAAGGCTGTGGGATTTGTGCGGGTGACTGTAAATGTAAGAATGGGGC AAAAATGTTTTGGGGAGAAACCCCGTGGGTAAAACCACCAGTGGTACCGGGACATGAATTCTACGGCCATATTGTGGCGC TGGGAGAAGGGACCGAATCGAAGTATAAGATCGGCGAACGTGTGATTGCGGAACAAATAGTCCCTTGCTGGGACTGTCGC TATTGCAACTCTGGCAGCTACTGGATGTGTGAAACGCACAATATCTATGGTTTCCAAAAAGATGTCGCTGAAGGTGGCAT GGCGGAATATATGCGTTTTTCTGAAAATGCCATTGTTCACAAAATCCCAGAGAGCCTGAGTCATGAAGATGCGGTCCTGA TCGAACCCATGGCCTGTGCGATTCATACTGTGGCAAGAGGGGATATTCAACTGGATGATGTGGTCGTACTGGCGGGCGCG GGGCCGCTGGGGCTGTGCATGGTACAGGTTGCCCGCCTGAAGACACCGAAGAAATTGATTGTCATTGATACTATTGAAGA ACGTTTGGCACTGGCAAAAGCCTTTGGGGCTGATGTGGTAATCAACCCATTGAAAGAAGATGCTGACAAAATAGTGAAAT CTTTGACCGGTGGCTATGGCTGTGACGTTTACATTGAAGCGACGGGTGCGCCCATCGGTGTGACTCAAGGCTTACAAATG ATCCGCAAGCTGGGGCGTTTTGTGGAGTTCAGTGTCTTTGGTCAGGAAACTACCGTTGATTGGTCCATTATCGGCGACCG TAAAGAACTGGATATTCGCGGTGCTCACCTGGCACCTTACAGTTATGAAATTGCCACCGATCTCTTTGAACGTGGTCTGG TTACCTCAAAAGGTATCGTCACCCACAGTTATTCATTAGATGATTGGGAAAAGGCTTTTGAGCTAGCGGACTCCACGAAT TCTATTAAGGTCATTCTGGTTCCTTAA
Upstream 100 bases:
>100_bases GACGGTTGTTGCGATCAGGATCTAAATTCATGACTTTGTTTAACATCAATTTAACAGCGTGTGACTTTGTTCAACAAATA GTTTCTGCCAATTTGGTTAT
Downstream 100 bases:
>100_bases TTATTGTTAGTAATTATCTGCTGATGTTTGATATTGACGGTTTATTTATCTTACTCAAAGGTAAAGTACCGTTTTATATC ATGTGGAATATTAACTTTTT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MILNVYVVISIFIMNAMSLLSVEVSNFTFVDLFKNDNVNIVSIHRVLLLLEELMSQLPEKMSAVVCHGPQDYRLEHVPTP VPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPPVVPGHEFYGHIVALGEGTESKYKIGERVIAEQIVPCWDCR YCNSGSYWMCETHNIYGFQKDVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA GPLGLCMVQVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYGCDVYIEATGAPIGVTQGLQM IRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPYSYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTN SIKVILVP
Sequences:
>Translated_408_residues MILNVYVVISIFIMNAMSLLSVEVSNFTFVDLFKNDNVNIVSIHRVLLLLEELMSQLPEKMSAVVCHGPQDYRLEHVPTP VPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPPVVPGHEFYGHIVALGEGTESKYKIGERVIAEQIVPCWDCR YCNSGSYWMCETHNIYGFQKDVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA GPLGLCMVQVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYGCDVYIEATGAPIGVTQGLQM IRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPYSYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTN SIKVILVP >Mature_408_residues MILNVYVVISIFIMNAMSLLSVEVSNFTFVDLFKNDNVNIVSIHRVLLLLEELMSQLPEKMSAVVCHGPQDYRLEHVPTP VPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPPVVPGHEFYGHIVALGEGTESKYKIGERVIAEQIVPCWDCR YCNSGSYWMCETHNIYGFQKDVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA GPLGLCMVQVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYGCDVYIEATGAPIGVTQGLQM IRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPYSYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTN SIKVILVP
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=355, Percent_Identity=30.1408450704225, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI71565154, Length=383, Percent_Identity=25.3263707571802, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4501929, Length=381, Percent_Identity=24.1469816272966, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI262073058, Length=305, Percent_Identity=24.9180327868852, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787863, Length=351, Percent_Identity=32.1937321937322, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1788073, Length=353, Percent_Identity=28.6118980169972, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1790045, Length=337, Percent_Identity=31.1572700296736, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI1788075, Length=361, Percent_Identity=28.5318559556787, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI87082125, Length=359, Percent_Identity=29.5264623955432, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI226510992, Length=347, Percent_Identity=27.6657060518732, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788407, Length=345, Percent_Identity=26.3768115942029, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1786825, Length=404, Percent_Identity=25.7425742574257, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790718, Length=324, Percent_Identity=25.6172839506173, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081918, Length=222, Percent_Identity=34.2342342342342, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786552, Length=362, Percent_Identity=30.1104972375691, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562876, Length=361, Percent_Identity=30.4709141274238, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17562878, Length=357, Percent_Identity=28.8515406162465, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI25146526, Length=389, Percent_Identity=23.9074550128535, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71997431, Length=389, Percent_Identity=23.6503856041131, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323099, Length=352, Percent_Identity=28.4090909090909, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6319955, Length=364, Percent_Identity=28.021978021978, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322619, Length=364, Percent_Identity=27.7472527472527, Blast_Score=119, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6319258, Length=373, Percent_Identity=26.0053619302949, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319257, Length=300, Percent_Identity=25.6666666666667, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324486, Length=334, Percent_Identity=27.2455089820359, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6323729, Length=347, Percent_Identity=25.6484149855908, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323980, Length=195, Percent_Identity=29.7435897435897, Blast_Score=73, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6320033, Length=252, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323961, Length=333, Percent_Identity=26.7267267267267, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319621, Length=253, Percent_Identity=28.8537549407115, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI17137530, Length=348, Percent_Identity=27.5862068965517, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI17737897, Length=347, Percent_Identity=27.9538904899135, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI17737895, Length=386, Percent_Identity=24.0932642487047, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 45043; Mature: 45043
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNVYVVISIFIMNAMSLLSVEVSNFTFVDLFKNDNVNIVSIHRVLLLLEELMSQLPEK CEEEHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHCHHH MSAVVCHGPQDYRLEHVPTPVPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPP HCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCC VVPGHEFYGHIVALGEGTESKYKIGERVIAEQIVPCWDCRYCNSGSYWMCETHNIYGFQK CCCCCHHCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCHH DVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA HHHCCCHHHHHHHCCCCHHHHCHHHCCCCCEEEECHHHHHHHHHHCCCEEECCEEEEECC GPLGLCMVQVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYG CHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCC CDVYIEATGAPIGVTQGLQMIRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPY EEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCEEECCCEECCC SYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTNSIKVILVP HHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MILNVYVVISIFIMNAMSLLSVEVSNFTFVDLFKNDNVNIVSIHRVLLLLEELMSQLPEK CEEEHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHCHHH MSAVVCHGPQDYRLEHVPTPVPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPP HCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCC VVPGHEFYGHIVALGEGTESKYKIGERVIAEQIVPCWDCRYCNSGSYWMCETHNIYGFQK CCCCCHHCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCHH DVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA HHHCCCHHHHHHHCCCCHHHHCHHHCCCCCEEEECHHHHHHHHHHCCCEEECCEEEEECC GPLGLCMVQVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYG CHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCC CDVYIEATGAPIGVTQGLQMIRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPY EEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCEEECCCEECCC SYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTNSIKVILVP HHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]