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The map label for this gene is rhtA [H]

Identifier: 170023846

GI number: 170023846

Start: 1774473

End: 1775360

Strand: Reverse

Name: rhtA [H]

Synonym: YPK_1605

Alternate gene names: 170023846

Gene position: 1775360-1774473 (Counterclockwise)

Preceding gene: 170023855

Following gene: 170023845

Centisome position: 37.86

GC content: 50.56

Gene sequence:

>888_bases
ATGTCGTTGTCTCCTTCTTCTAAAAACTCACTGCCATTACTCCCCATTTTGTTGCTCGTGATCGCCATGATCTCAATACA
AAGTGGTGCATCACTGGCAAAAAGCTTATTCCCACTGGTCGGTGCACAAGGTATTACCTCGCTGCGGCTCGGCATCGGTA
CACTTATTCTGTTTGTTATTTTTAAACCTTGGCGGATGCGGTTTGCTGCAGGCAGCCGTTTACCCCTATTAATTTATGGG
GTGGCATTAGGTGGGATGAACTTCTTGTTCTACATGTCGTTAAAAACGGTGCCATTAGGCATCGCTGTAGCACTGGAATT
CACAGGGCCTCTGGCCGTCGCTATGTTTTCTTCCCGGCGTGCGGTAGATTTTATCTGGGTGGGGCTCGCCATTCTGGGGT
TATGGTTCCTGTTACCACTGGGGCATAACATTGGCACCATTGATTTATTTGGTGCAGCCTGTGCTTTAGGTGCAGGGGCC
TGCTGGGCAATCTATATCATTTCGGGTCAAAAGGCCGGAGGTGACCATGGCCCAGCGACTGTCGCGGTCGGCTCGTTGAT
TGCGGCCTTGATTTTCTGCCCAATTGGGGTGGCCTATAACGGCATGGCACTGTTCGATCCGGCGATCTTGCCCATTGCAC
TGGCCGTCGCCATTTTGTCTACTGCATTACCTTACTCACTCGAGATGGTCGCGTTAACTCGCCTTCCTGCCCGGACATTT
GGCACATTAATGAGTCTGGAACCTGCATTAGCCGCAATTTCAGGTCTGGTGTTCTTAAATGAGCATCTGACCTTGGTGCA
ATGGCTCGCGTTAGCATCAATTATCAGTGCCTCCGTTGGTGCCAGCCTGACCATAAAACCTAAACCACAACTTGACCAGG
TCACCTGA

Upstream 100 bases:

>100_bases
TTTCTCTTTTTTGCCGTTTGATGATTTTTCAACACTCAGTTGGCATTTCATTTACACTGGAAAAACTCACGCATAACTCT
TTTCTTCGAGGCTCCAAAGG

Downstream 100 bases:

>100_bases
TAGGAGGAGCCATCAATGGAAATCAGAACCGCAACGCCCGCCGATTTTGCTGAGATATGGCCTCTGTTCCAGGCGGTTAT
CCGCAGCGGTGACACCTACG

Product: threonine and homoserine efflux system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSLSPSSKNSLPLLPILLLVIAMISIQSGASLAKSLFPLVGAQGITSLRLGIGTLILFVIFKPWRMRFAAGSRLPLLIYG
VALGGMNFLFYMSLKTVPLGIAVALEFTGPLAVAMFSSRRAVDFIWVGLAILGLWFLLPLGHNIGTIDLFGAACALGAGA
CWAIYIISGQKAGGDHGPATVAVGSLIAALIFCPIGVAYNGMALFDPAILPIALAVAILSTALPYSLEMVALTRLPARTF
GTLMSLEPALAAISGLVFLNEHLTLVQWLALASIISASVGASLTIKPKPQLDQVT

Sequences:

>Translated_295_residues
MSLSPSSKNSLPLLPILLLVIAMISIQSGASLAKSLFPLVGAQGITSLRLGIGTLILFVIFKPWRMRFAAGSRLPLLIYG
VALGGMNFLFYMSLKTVPLGIAVALEFTGPLAVAMFSSRRAVDFIWVGLAILGLWFLLPLGHNIGTIDLFGAACALGAGA
CWAIYIISGQKAGGDHGPATVAVGSLIAALIFCPIGVAYNGMALFDPAILPIALAVAILSTALPYSLEMVALTRLPARTF
GTLMSLEPALAAISGLVFLNEHLTLVQWLALASIISASVGASLTIKPKPQLDQVT
>Mature_294_residues
SLSPSSKNSLPLLPILLLVIAMISIQSGASLAKSLFPLVGAQGITSLRLGIGTLILFVIFKPWRMRFAAGSRLPLLIYGV
ALGGMNFLFYMSLKTVPLGIAVALEFTGPLAVAMFSSRRAVDFIWVGLAILGLWFLLPLGHNIGTIDLFGAACALGAGAC
WAIYIISGQKAGGDHGPATVAVGSLIAALIFCPIGVAYNGMALFDPAILPIALAVAILSTALPYSLEMVALTRLPARTFG
TLMSLEPALAAISGLVFLNEHLTLVQWLALASIISASVGASLTIKPKPQLDQVT

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=291, Percent_Identity=68.7285223367698, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30769; Mature: 30638

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSPSSKNSLPLLPILLLVIAMISIQSGASLAKSLFPLVGAQGITSLRLGIGTLILFVI
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FKPWRMRFAAGSRLPLLIYGVALGGMNFLFYMSLKTVPLGIAVALEFTGPLAVAMFSSRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHCCCC
AVDFIWVGLAILGLWFLLPLGHNIGTIDLFGAACALGAGACWAIYIISGQKAGGDHGPAT
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH
VAVGSLIAALIFCPIGVAYNGMALFDPAILPIALAVAILSTALPYSLEMVALTRLPARTF
HHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH
GTLMSLEPALAAISGLVFLNEHLTLVQWLALASIISASVGASLTIKPKPQLDQVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
SLSPSSKNSLPLLPILLLVIAMISIQSGASLAKSLFPLVGAQGITSLRLGIGTLILFVI
CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FKPWRMRFAAGSRLPLLIYGVALGGMNFLFYMSLKTVPLGIAVALEFTGPLAVAMFSSRR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHCCCC
AVDFIWVGLAILGLWFLLPLGHNIGTIDLFGAACALGAGACWAIYIISGQKAGGDHGPAT
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHH
VAVGSLIAALIFCPIGVAYNGMALFDPAILPIALAVAILSTALPYSLEMVALTRLPARTF
HHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHH
GTLMSLEPALAAISGLVFLNEHLTLVQWLALASIISASVGASLTIKPKPQLDQVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]