Click here to switch to the map view.

The map label for this gene is 170023721

Identifier: 170023721

GI number: 170023721

Start: 1638004

End: 1639506

Strand: Direct

Name: 170023721

Synonym: YPK_1480

Alternate gene names: NA

Gene position: 1638004-1639506 (Clockwise)

Preceding gene: 170023720

Following gene: 170023722

Centisome position: 34.93

GC content: 46.44

Gene sequence:

>1503_bases
ATGTCCACTCAAGACGCAAAAACTAAACAAGCTACAGTCGCCAGTGCGACGGAATATAGCGATTTTAATACATTACTGAC
TAAAGAATTTAAAGCGAAGTCTGAGCAGACGATAGCAGCAGTAGAAGGTGCCGTTAAAACGTTGGCTGAGCAAGCGCTGG
CTAATTCGGTCACGGTGTCAGACGATGCTTATAAAAGCATTGCTTCCATTATTGCAGAGATTGATCGCAAGCTATCAGAT
CAGATTAATTTAATTTTGCACCACCAAGAATTCCAGTCTCTGGAAAGCGCATGGCGTGGGCTACACTATTTAGTCAATAA
CACCGAGACTGATGAGAAGTTGAGATTACGTTTCCTCGACATCTCTAAAGATGAATTACGCCGTAACATGAAGCGTTATA
AAGGTGTTGCTTGGGATCAAAGCCCATTATTCAAAAAAATCTATGAAGAAGAATATGGCCAACTGGGTGGCGAACCATAC
GGTTGCCTGGTAGCAGACTATTACTTTGACCATACTGCACCTGACGTTGACTTGTTGGCTTCAATTGGCAAAGTTGCCGC
GTCTGCCCACGTGCCATTTATTACAGGTGCTGCACCGTCTGTGTTGCAAATGGAATCTTGGCAAGAACTGTCAAACCCAC
GTGATTTGACGAAGATCTTCACTCAGAATCTTGAGTATGCCGCATGGAACTCACTGCGTCAGTCTGAAGACTCTCGCTAT
ATCGGCCTGGCGATGCCACGTTTCTTGTCGCGTCTGCCTTATGGGATTAATACCAACCCGGTAGATGCCTTCCATTTTGA
AGAGACGACGGATGGCGCGGATCACAGCAAATATGTGTGGTCAAATGCGGCTTATGCGATGGCTGTTAACATCAACCGAT
CTTTCAAAGAGTATGGCTGGTGTACGCTGATTCGTGGGGTGGAAAGTGGTGGTGTTGTTGAAGGCCTGCCATGCCATACC
TTCCCGACGGATGACGGCGGTATTGATATGAAATGCCCAACAGAAATCGCTATTTCTGACCGTCGTGAAGCGGAACTGGC
CAAGAATGGTTTTATTCCACTGGTTCACAGAAAGAATACTGATTACGCGGCATTCATTGGCGCGCAGTCCCTGCAAAAAC
CTGCAGAATATTACGATTCGGATGCAACGGCGAACGCCAACCTTTCCGCTCGTCTGCCATACCTGTTTGCTTGTTCACGT
TTTGCACATTATCTGAAGTGCATCGTGCGTGACAAAATCGGCTCTTTCAAAGAGCGTGATGAGATGCAACGTTGGTTGAA
TGACTGGGTGATGAACTATGTTGATGGTGACCCGGCTAACTCTTCTCTGGAAACTAAAGCGCGCCGTCCTTTAGCCGCTG
CTGAAGTGATTGTTGAAGAAGTTGAAGGTAACCCTGGTTACTATCAGGCTAAATTCTTCTTACGCCCTCATTTCCAGTTA
GAAGGTTTGACAGTCTCCCTGCGTATGGTTGCTAAACTGCCTTCGCTGAAAGACGTAGCATAA

Upstream 100 bases:

>100_bases
TGAAAGACAAATCATTACTGACAACGCTTGCATCCGCACCGAAAGCAAAACAATCCGCTGTTGATACTCCACAGTAAGAT
TGATTAAGAAGAGAAAAACT

Downstream 100 bases:

>100_bases
TTAAATAGATTAAAACAGTTCGTTGATGACGAGACAATACTCTCTGCCAACGTGTTGTAAGCATTAATATTTAACTGTTT
CACGTCTTGTTATACAGCAG

Product: EvpB family type VI secretion protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSTQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVSDDAYKSIASIIAEIDRKLSD
QINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLDISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPY
GCLVADYYFDHTAPDVDLLASIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRY
IGLAMPRFLSRLPYGINTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHT
FPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSR
FAHYLKCIVRDKIGSFKERDEMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQL
EGLTVSLRMVAKLPSLKDVA

Sequences:

>Translated_500_residues
MSTQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVSDDAYKSIASIIAEIDRKLSD
QINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLDISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPY
GCLVADYYFDHTAPDVDLLASIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRY
IGLAMPRFLSRLPYGINTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHT
FPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSR
FAHYLKCIVRDKIGSFKERDEMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQL
EGLTVSLRMVAKLPSLKDVA
>Mature_499_residues
STQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVSDDAYKSIASIIAEIDRKLSDQ
INLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLDISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYG
CLVADYYFDHTAPDVDLLASIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRYI
GLAMPRFLSRLPYGINTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHTF
PTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSRF
AHYLKCIVRDKIGSFKERDEMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQLE
GLTVSLRMVAKLPSLKDVA

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56197; Mature: 56066

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEC
DDAYKSIASIIAEIDRKLSDQINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLD
HHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
ISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLLA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCHHHHH
SIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRY
HHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCE
IGLAMPRFLSRLPYGINTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGW
EEEHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHCH
CTLIRGVESGGVVEGLPCHTFPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNT
HHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCEEEEEECCC
DYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKERD
CCEEHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQL
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEE
EGLTVSLRMVAKLPSLKDVA
CCEEEEHHHHHHCCCCCCCC
>Mature Secondary Structure 
STQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEC
DDAYKSIASIIAEIDRKLSDQINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLD
HHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
ISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLLA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCHHHHH
SIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRY
HHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCE
IGLAMPRFLSRLPYGINTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGW
EEEHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHCH
CTLIRGVESGGVVEGLPCHTFPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNT
HHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCEEEEEECCC
DYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKERD
CCEEHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQL
HHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEE
EGLTVSLRMVAKLPSLKDVA
CCEEEEHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA