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The map label for this gene is F17a-A [H]

Identifier: 170023716

GI number: 170023716

Start: 1632494

End: 1633039

Strand: Direct

Name: F17a-A [H]

Synonym: YPK_1475

Alternate gene names: 170023716

Gene position: 1632494-1633039 (Clockwise)

Preceding gene: 170023715

Following gene: 170023717

Centisome position: 34.81

GC content: 44.32

Gene sequence:

>546_bases
ATGCGTAAATTAAATCTTGCTGTATGTGCAGTGGCTCTGTCTGTTATCTCTTCAACTTCTTATGCTGCTGCTGGCGGTAC
TGTTACGTTCAACGGTAAATTGATTGCTGATACTTGTCAGGTTGATACCGCAAGCGAGAATATCACGGTAACACTGCCTA
CTCTTTCTATCCAGTCTTTGGCTGTAGCTGAAGCTCAAGATGGTTCTAAGGACTTTGAAATCAAAGTTCTGGATTGCCCG
GCAACACTGACTCAAGTCGGTGCCCATTTTAATGCGATTGATAGCTCAGGTGTTAATCCGGCAACCGGTAACTTGGTGAA
CAAAGCACCAACTGATGCTGCGGGTAATGTTGAAGTGCGTTTGTACAACGTTGATGACAGCAGCCAGATCCGTGTAGGTT
CAACGGGTAACATGGTCAACATCGTCAAAGTAGGTGCTACACCAGGTACAGCTAATCTGACCTATGCTGGTGGTTATTAT
GCAACAGATGCAACTACCCCAGGTGAAGTGAATGCTAAAGTTGAATACGTTTTAGCTTATAACTAA

Upstream 100 bases:

>100_bases
TTGAAAAAAGAAAGGCAATAAAAAATAGCTAATATTGGCATGAGCGAATATTAACTATATGTTTAATAAATCTGGATTTT
TAAATTAAAGGATGAACGCA

Downstream 100 bases:

>100_bases
TCACCGATTAGGGTGATAGGCGTGTGGTCCACTTTATGTGGGTCACCGCAGCAGTAAAGCATAACAGCTTGCTGCCGAGG
CGGATAAAACGCTGCGGTAG

Product: fimbrial protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVLDCP
ATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYY
ATDATTPGEVNAKVEYVLAYN

Sequences:

>Translated_181_residues
MRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVLDCP
ATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYY
ATDATTPGEVNAKVEYVLAYN
>Mature_181_residues
MRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVLDCP
ATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYY
ATDATTPGEVNAKVEYVLAYN

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081804, Length=175, Percent_Identity=33.1428571428571, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18567; Mature: 18567

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSL
CCCCHHHHHHHHHHHHCCCCEECCCCEEEECCEEEEEEEEECCCCCCEEEEECCCEEEEE
AVAEAQDGSKDFEIKVLDCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVR
EEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYYATDATTPGEVNAKVEYVLAY
EEECCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCEEECCCCCCCCCCEEEEEEEEE
N
C
>Mature Secondary Structure
MRKLNLAVCAVALSVISSTSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSL
CCCCHHHHHHHHHHHHCCCCEECCCCEEEECCEEEEEEEEECCCCCCEEEEECCCEEEEE
AVAEAQDGSKDFEIKVLDCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVR
EEEECCCCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LYNVDDSSQIRVGSTGNMVNIVKVGATPGTANLTYAGGYYATDATTPGEVNAKVEYVLAY
EEECCCCCEEEECCCCCEEEEEEECCCCCCCEEEEECCEEECCCCCCCCCCEEEEEEEEE
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]