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The map label for this gene is yhhZ [H]

Identifier: 170023700

GI number: 170023700

Start: 1610481

End: 1610960

Strand: Reverse

Name: yhhZ [H]

Synonym: YPK_1459

Alternate gene names: 170023700

Gene position: 1610960-1610481 (Counterclockwise)

Preceding gene: 170023702

Following gene: 170023697

Centisome position: 34.35

GC content: 40.0

Gene sequence:

>480_bases
ATGGCTAACATGATTTATTTAACACTCAAGGGCAAAAAACAGGGGTTAATTTCGTCTGGGTGCTCATCAATTGACTCAAT
AGGCAATAAAAGCCAAGGCAGTCACATAGATCAGATATTTGTACTCAGCCTTAATCACGCCATGACCCGAGAACAAAACG
TCAGCCACCACCCCATTTCTTTTATAAAACCCATCGATAAATCATCCCCCTTATTAGGGGTGGCCATATCAGAAAATGAA
TTGCTTGATGCCGTTTTTGACTTTTATAGAACAAACAGCGCTGGTGCTTTAGAACTTTACTATACAATATCCATTACCGG
CGCGACAATTTCAGACATATCAACTTCACATAGCCATTCAATCACACACAATGGCTCCCAACCACAAGAAACCATCTCTC
TTAAATACAAAAGCATTACATGGAATCACAATGTAGCAGGAACCAGTGGTTATAGCATATGGGATGATCGCGTGTATTAA

Upstream 100 bases:

>100_bases
CGTATTTATTTTAAGGTCAACGGCACTAAATGACTGGAATGAGCAAGGGCAACTAACCCCCTGCATCTTGAAGGCGACGG
GTATATAAGGACATATGAGA

Downstream 100 bases:

>100_bases
TTTATTCGGGGATGGCCTACGCCATCCCTTATTATTTACGTGTACATACGCCTTGCGACAATATAAGGAATGGCACTTAA
CCAACCTAATATCAATGACA

Product: Hcp1 family type VI secretion system effector

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPISFIKPIDKSSPLLGVAISENE
LLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHSITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY

Sequences:

>Translated_159_residues
MANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPISFIKPIDKSSPLLGVAISENE
LLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHSITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY
>Mature_158_residues
ANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPISFIKPIDKSSPLLGVAISENEL
LDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHSITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

Organism=Escherichia coli, GI1789850, Length=150, Percent_Identity=42.6666666666667, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 17435; Mature: 17304

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPIS
CCCEEEEEEECCCCCCHHHCCHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCHH
FIKPIDKSSPLLGVAISENELLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHS
EECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCCCCCC
ITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY
CCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEECCCCCC
>Mature Secondary Structure 
ANMIYLTLKGKKQGLISSGCSSIDSIGNKSQGSHIDQIFVLSLNHAMTREQNVSHHPIS
CCEEEEEEECCCCCCHHHCCHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCHH
FIKPIDKSSPLLGVAISENELLDAVFDFYRTNSAGALELYYTISITGATISDISTSHSHS
EECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCCCCCC
ITHNGSQPQETISLKYKSITWNHNVAGTSGYSIWDDRVY
CCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]