| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fbpB [H]
Identifier: 170023618
GI number: 170023618
Start: 1514140
End: 1515909
Strand: Direct
Name: fbpB [H]
Synonym: YPK_1376
Alternate gene names: 170023618
Gene position: 1514140-1515909 (Clockwise)
Preceding gene: 170023617
Following gene: 170023619
Centisome position: 32.29
GC content: 52.37
Gene sequence:
>1770_bases ATGAAAGCATTGCGCAGAAAATGGCAGAGCTTGCCGCGCGGCTTAGTTGTGTTGATAACCGCACTGGTTATCTACATACC GATATCATTTATTATTATTCAAAGCTTCCTGTCAGCTCCTTTTTTCTCCCCTTCAAAGGTACTGAGTCTTGATGCGTTCA GGTTTATTTTTTCTGATCCTGATTTTTACAAGGCGCTGAAAAGTGGTTTTATTCTGGCGACAGGGCTAGTGGTGATTGCT ATTCCACTCGGGGGGATCCTGGCCTTTCTGATGATAAGGACTGACTTACCTGGCCGGCGGATAATTGAACCGTTGATTCT GGTGCCTATCTTTGTCTCACCCATGGTCTTGGGCTTTGGTTATGTGGTGGCGGCTGGGCCTGTGGGCTTCTTCTCTTTGT GGGCAGAATCCTTACTGGGTTTCGTACCCTGGAATATTTACGCCATGTCTAGCATCGTGGTGATCGCTGGCCTGACCCAT GTTCCTCATGCCTATCTCTATATTTCATCGGCACTACGCAGCGTCGGTTCTGATGTTGAAGAGGCTGCCCGCACGGCAGG GGCTTCGCCATTACAGGTGATGAGTGCGGTCAGTTTGCCAATGGTGCGCCCATCGATCCTCTATGCCACCGTGTTGTTGT TCTTCCTGGGGCTAGAAGTATTTGGGTTGATGTTGGTGCTGGGTGATCCGGAAGGAAACTTGGTGCTGGCGACCTATCTC TATCAATTGACCAATAAACTGGGTACGCCGTCTTATCATTTGATGGCTGCGGTTGCTGTGGTGCTCATCTGCATCACTAT TCCGCTCGTGATGTTACAACGCATGCTGATGCGAACGGCTCACCGTTTTGTTACGGTCAAAGGCAAAGCCTCACAGGCAC GGGCCTTGCCACTGGGCAAATGGCGTTGGGTTGCCGGTGCGGTGGTGGCATTTTGGTTGACGGTGACGATTGGCGTACCG TTGGTGGGGGTCGTGCTGCGCGCCTTTGTGTCTAACTGGGGGGTTGGGGTGTCCCTTTGGGATGAACTGTCCCTCAGTAC GTTCTACACCATTTGGCAACAGCCGAATCTACTGCGGGCTATCGTTAACTCGATGGCTATCGGGGTGTTCGGTGGGGCGT TGGCTGTTATTTGTTATCTGTTTATTGGTATCGCGATGCACCGCAAGCCCGATGGGGTGACTCGCTTCCTCGACTACAGT GTATTGGTGCCGCGTGCCGTACCGGGTTTATTGGCTGGGTTGGCATTCCTTTGGGTCTTTCTGTTCTTGCCTATGTGGCT GGATAACTCCCTGAAAGAGGGTTGGCTGGCCGCATTACCCATGACCGAGTGGTTACAGGACCATCTGGTGGTGTGGCTAC GTTCCTTGCGCAGCACCATCTTCAGTGTCTGGCTGGCGTATACCGTGGTATGGATGGCATATGGCCTGCGGTTGATCTCC TCGACCCTGTTGCAGGTCGGACCAGAGCTGGAAGAAGCCGCGCGCAGTACTGGTGCCCGCCGTGGTCAGGTTACCCGCCA TGTCACTATTCCGTTATCCCGCTATGGCCTGATTGGTTCATGGTTGCTGATGTTCTTGATTTTTGAGCGTGAATATTCCA CCGGTGTTTATCTCCTTTCACCGGGCACGGAAACCATAGGTTCGATGCTGGTCTCGCTGTGGGCGGCGGGTGCCATTGAT ATCGTCGCCGCACTCTCCTTTATCAATATCCTTCTGGTGGTGTTAGGCCTCGGTATTGCACTACGTTTTGGAGTCAAATT ACATGATTGA
Upstream 100 bases:
>100_bases AAATAGTGGCTTTATCTGGGTGCGCTTGCCTTATGGGCATGCGCAGTCCTTGGTTTTATCGGCTTGATCATACATGGATC TTTAACCAACAGGGCTCACT
Downstream 100 bases:
>100_bases ATTATCGGTAGATAACCTGCATTTAACCTATGGTGACAATCCCGTGTTGAAAGGGGTGTCCATGGAATTAAAACGGGGCG AAGTTGTCTCGCTGCTCGGG
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MKALRRKWQSLPRGLVVLITALVIYIPISFIIIQSFLSAPFFSPSKVLSLDAFRFIFSDPDFYKALKSGFILATGLVVIA IPLGGILAFLMIRTDLPGRRIIEPLILVPIFVSPMVLGFGYVVAAGPVGFFSLWAESLLGFVPWNIYAMSSIVVIAGLTH VPHAYLYISSALRSVGSDVEEAARTAGASPLQVMSAVSLPMVRPSILYATVLLFFLGLEVFGLMLVLGDPEGNLVLATYL YQLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRMLMRTAHRFVTVKGKASQARALPLGKWRWVAGAVVAFWLTVTIGVP LVGVVLRAFVSNWGVGVSLWDELSLSTFYTIWQQPNLLRAIVNSMAIGVFGGALAVICYLFIGIAMHRKPDGVTRFLDYS VLVPRAVPGLLAGLAFLWVFLFLPMWLDNSLKEGWLAALPMTEWLQDHLVVWLRSLRSTIFSVWLAYTVVWMAYGLRLIS STLLQVGPELEEAARSTGARRGQVTRHVTIPLSRYGLIGSWLLMFLIFEREYSTGVYLLSPGTETIGSMLVSLWAAGAID IVAALSFINILLVVLGLGIALRFGVKLHD
Sequences:
>Translated_589_residues MKALRRKWQSLPRGLVVLITALVIYIPISFIIIQSFLSAPFFSPSKVLSLDAFRFIFSDPDFYKALKSGFILATGLVVIA IPLGGILAFLMIRTDLPGRRIIEPLILVPIFVSPMVLGFGYVVAAGPVGFFSLWAESLLGFVPWNIYAMSSIVVIAGLTH VPHAYLYISSALRSVGSDVEEAARTAGASPLQVMSAVSLPMVRPSILYATVLLFFLGLEVFGLMLVLGDPEGNLVLATYL YQLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRMLMRTAHRFVTVKGKASQARALPLGKWRWVAGAVVAFWLTVTIGVP LVGVVLRAFVSNWGVGVSLWDELSLSTFYTIWQQPNLLRAIVNSMAIGVFGGALAVICYLFIGIAMHRKPDGVTRFLDYS VLVPRAVPGLLAGLAFLWVFLFLPMWLDNSLKEGWLAALPMTEWLQDHLVVWLRSLRSTIFSVWLAYTVVWMAYGLRLIS STLLQVGPELEEAARSTGARRGQVTRHVTIPLSRYGLIGSWLLMFLIFEREYSTGVYLLSPGTETIGSMLVSLWAAGAID IVAALSFINILLVVLGLGIALRFGVKLHD >Mature_589_residues MKALRRKWQSLPRGLVVLITALVIYIPISFIIIQSFLSAPFFSPSKVLSLDAFRFIFSDPDFYKALKSGFILATGLVVIA IPLGGILAFLMIRTDLPGRRIIEPLILVPIFVSPMVLGFGYVVAAGPVGFFSLWAESLLGFVPWNIYAMSSIVVIAGLTH VPHAYLYISSALRSVGSDVEEAARTAGASPLQVMSAVSLPMVRPSILYATVLLFFLGLEVFGLMLVLGDPEGNLVLATYL YQLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRMLMRTAHRFVTVKGKASQARALPLGKWRWVAGAVVAFWLTVTIGVP LVGVVLRAFVSNWGVGVSLWDELSLSTFYTIWQQPNLLRAIVNSMAIGVFGGALAVICYLFIGIAMHRKPDGVTRFLDYS VLVPRAVPGLLAGLAFLWVFLFLPMWLDNSLKEGWLAALPMTEWLQDHLVVWLRSLRSTIFSVWLAYTVVWMAYGLRLIS STLLQVGPELEEAARSTGARRGQVTRHVTIPLSRYGLIGSWLLMFLIFEREYSTGVYLLSPGTETIGSMLVSLWAAGAID IVAALSFINILLVVLGLGIALRFGVKLHD
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=275, Percent_Identity=28, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 64650; Mature: 64650
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50928 ABC_TM1 ; PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRRKWQSLPRGLVVLITALVIYIPISFIIIQSFLSAPFFSPSKVLSLDAFRFIFSDP CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC DFYKALKSGFILATGLVVIAIPLGGILAFLMIRTDLPGRRIIEPLILVPIFVSPMVLGFG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH YVVAAGPVGFFSLWAESLLGFVPWNIYAMSSIVVIAGLTHVPHAYLYISSALRSVGSDVE HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH EAARTAGASPLQVMSAVSLPMVRPSILYATVLLFFLGLEVFGLMLVLGDPEGNLVLATYL HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHH YQLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRMLMRTAHRFVTVKGKASQARALPLGK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC WRWVAGAVVAFWLTVTIGVPLVGVVLRAFVSNWGVGVSLWDELSLSTFYTIWQQPNLLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IVNSMAIGVFGGALAVICYLFIGIAMHRKPDGVTRFLDYSVLVPRAVPGLLAGLAFLWVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLPMWLDNSLKEGWLAALPMTEWLQDHLVVWLRSLRSTIFSVWLAYTVVWMAYGLRLIS HHHHHHHCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STLLQVGPELEEAARSTGARRGQVTRHVTIPLSRYGLIGSWLLMFLIFEREYSTGVYLLS HHHHHHCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC PGTETIGSMLVSLWAAGAIDIVAALSFINILLVVLGLGIALRFGVKLHD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure MKALRRKWQSLPRGLVVLITALVIYIPISFIIIQSFLSAPFFSPSKVLSLDAFRFIFSDP CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC DFYKALKSGFILATGLVVIAIPLGGILAFLMIRTDLPGRRIIEPLILVPIFVSPMVLGFG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH YVVAAGPVGFFSLWAESLLGFVPWNIYAMSSIVVIAGLTHVPHAYLYISSALRSVGSDVE HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH EAARTAGASPLQVMSAVSLPMVRPSILYATVLLFFLGLEVFGLMLVLGDPEGNLVLATYL HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHHH YQLTNKLGTPSYHLMAAVAVVLICITIPLVMLQRMLMRTAHRFVTVKGKASQARALPLGK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC WRWVAGAVVAFWLTVTIGVPLVGVVLRAFVSNWGVGVSLWDELSLSTFYTIWQQPNLLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHH IVNSMAIGVFGGALAVICYLFIGIAMHRKPDGVTRFLDYSVLVPRAVPGLLAGLAFLWVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFLPMWLDNSLKEGWLAALPMTEWLQDHLVVWLRSLRSTIFSVWLAYTVVWMAYGLRLIS HHHHHHHCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STLLQVGPELEEAARSTGARRGQVTRHVTIPLSRYGLIGSWLLMFLIFEREYSTGVYLLS HHHHHHCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC PGTETIGSMLVSLWAAGAIDIVAALSFINILLVVLGLGIALRFGVKLHD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]