| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023617
Identifier: 170023617
GI number: 170023617
Start: 1512957
End: 1514045
Strand: Direct
Name: 170023617
Synonym: YPK_1375
Alternate gene names: NA
Gene position: 1512957-1514045 (Clockwise)
Preceding gene: 170023611
Following gene: 170023618
Centisome position: 32.26
GC content: 47.75
Gene sequence:
>1089_bases ATGTTAAGGAAAATTAAAGTATTTATGTTCGCGATGGCGGCATTAACCACTCTTCCTGCATTCGCTCAACTTCCAAGCTA TTACCCCGCCGATTATCAGAAGATTGTGGATGGTGCAAAAAAAGAGGGCAAAGTGGTGGTCTATTCTGCGACGGATATTA AGGCGGCAGCCCCGTTGATTAAGGGATTCGAAGCGGCTTATCCGGGTATTAAAGTTGAATACAACGATATGAATAGCACG GAGTTATACAACCGCTACATCAGTGAGCAGGCATCGGGGAGCACCAGTGGCGATGTTGTGTGGAGTTCCTCCATGGATAC CGCACTCAAGTTGGCTACCGACTATGCGCTCGAATACCTCTCCCCTGAGCAGGCGGAGTTGCCGAAATGGGCAATATGGA AAAACAAAGCCTACGGCTCTACTTACGAACCCGTTGTCTTTATCTATAACAAGCGCCTGATCCCACAGGCCGATATGCCT GATACCCACATCGCACTGGCAAAACTCATCGTTAGCCAGCCTGATAAATTCAAAAGGAAAATCACAACCTATGATATTGA AAAATCAGGCTTAGGGTTCATGTTGTCGGTACAGGATTTCAAGGCGGATCCGAATTACTTTACGACACTGGCTAATATCG CTAAAGGTGGTCTGACCGTGCAATCCTCCACCGGGACGATGATGGAACGGGTGTCATCCGGTGAAAATCTGATTGGTTTT AACATCCTCGGTTCTTACGCTGAAACCCGTGCCAAAACGGACCCTTCTCTTGGGATCGCCTACCCGAAGGATTACACACT GGTGCTATCGCGGGTGACCTTTATCAGCCAAAAGGCTCCCCACCAGAATGCAGCCAAGCTGTGGGTTGACTATCTGCTCT CAGAGAAAGGCCAAAATATTCTGGCCAATCAGTCAGATATTCCTTCTATCCGCAAAGATATTGACGGTAACAACGATATT GATGGTCTGACCAAAAAACTGGGCAGTGCGCTGAGACCCATCCCGGTTGATGAGAGCCTATTGGAATATATGGAACAGGC TAAACGTTTGGACTACATCAAACAGTGGCGTACCGCAGCAGCAAAATAG
Upstream 100 bases:
>100_bases TCACAAAATAGGAAGACAAAGAATTAACTTCGTTGCGCAGGAATAGACATTAACTATATGTTGATTTTTCGTTTCATAAA TGAGACCAGAGGTTAAATAT
Downstream 100 bases:
>100_bases TGGCTTTATCTGGGTGCGCTTGCCTTATGGGCATGCGCAGTCCTTGGTTTTATCGGCTTGATCATACATGGATCTTTAAC CAACAGGGCTCACTATGAAA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVEYNDMNST ELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMP DTHIALAKLIVSQPDKFKRKITTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDI DGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK
Sequences:
>Translated_362_residues MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVEYNDMNST ELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMP DTHIALAKLIVSQPDKFKRKITTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDI DGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK >Mature_362_residues MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVEYNDMNST ELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMP DTHIALAKLIVSQPDKFKRKITTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDI DGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40234; Mature: 40234
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHH KGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYL HHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHC SPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPDKFKRK CCCHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH ITTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF HHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEH NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNI HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAA CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AK CC >Mature Secondary Structure MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHH KGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYL HHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHC SPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPDKFKRK CCCHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH ITTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF HHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEH NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNI HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAA CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA