Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023601

Identifier: 170023601

GI number: 170023601

Start: 1500962

End: 1501381

Strand: Direct

Name: 170023601

Synonym: YPK_1359

Alternate gene names: NA

Gene position: 1500962-1501381 (Clockwise)

Preceding gene: 170023600

Following gene: 170023604

Centisome position: 32.01

GC content: 35.24

Gene sequence:

>420_bases
ATGAAGATTTTGAAAAGACTCATTTTTATTTGTCTGGTCATTATTATTATTTTTTTTCTTATCGATTGCAGTATGCAAAA
GGTGGCAGAGGGGAGAGACGGGTATACAAGGTCAAATATCTGGGCATATTATTTGTATACAGACAAAGATATTAGGTCTG
CCCCAAGGGCAGCTGAATCTTATTATTTTATATTTACAGCTCAGGACGGGAGTCAGCCAAGAGAAAGTAGTATTGTCTAT
AGGGATGATGTTTGTTTATCTGACGTTAAAAATCATCTCACTACCTTAGGATACAGGGTATCAGATCATGATGGGCTATC
TGAAAAGTGGATTAAAAAAGATGAAGTTATTCCTTATTTCTATATATCAATCGATAAGTACACACATACCGTGACTCTAA
GTAAAGTCAGTTTGAGGTGA

Upstream 100 bases:

>100_bases
TATGATGCAGGTTACACCCTATAAATTTCATCCAAATGATGACACTGTTATTCGCACCAGTAAGAAAGCTGGAATCATCA
CTCAATTGAGTAATTAGATA

Downstream 100 bases:

>100_bases
TTTTTACAGAGTCAGATTTTTCATATCAGCTGATTGATAAATAATATAATGCTGTCATCGATATGATGAACAGTAATAAA
ATTTCATTTTGACCGCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAESYYFIFTAQDGSQPRESSIVY
RDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYFYISIDKYTHTVTLSKVSLR

Sequences:

>Translated_139_residues
MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAESYYFIFTAQDGSQPRESSIVY
RDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYFYISIDKYTHTVTLSKVSLR
>Mature_139_residues
MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAESYYFIFTAQDGSQPRESSIVY
RDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYFYISIDKYTHTVTLSKVSLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16270; Mature: 16270

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAES
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCHHHHCCCCCCC
YYFIFTAQDGSQPRESSIVYRDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYF
EEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCCEEE
YISIDKYTHTVTLSKVSLR
EEEEECEEEEEEEEEEECC
>Mature Secondary Structure
MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAES
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCHHHHCCCCCCC
YYFIFTAQDGSQPRESSIVYRDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYF
EEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCCEEE
YISIDKYTHTVTLSKVSLR
EEEEECEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA