| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023601
Identifier: 170023601
GI number: 170023601
Start: 1500962
End: 1501381
Strand: Direct
Name: 170023601
Synonym: YPK_1359
Alternate gene names: NA
Gene position: 1500962-1501381 (Clockwise)
Preceding gene: 170023600
Following gene: 170023604
Centisome position: 32.01
GC content: 35.24
Gene sequence:
>420_bases ATGAAGATTTTGAAAAGACTCATTTTTATTTGTCTGGTCATTATTATTATTTTTTTTCTTATCGATTGCAGTATGCAAAA GGTGGCAGAGGGGAGAGACGGGTATACAAGGTCAAATATCTGGGCATATTATTTGTATACAGACAAAGATATTAGGTCTG CCCCAAGGGCAGCTGAATCTTATTATTTTATATTTACAGCTCAGGACGGGAGTCAGCCAAGAGAAAGTAGTATTGTCTAT AGGGATGATGTTTGTTTATCTGACGTTAAAAATCATCTCACTACCTTAGGATACAGGGTATCAGATCATGATGGGCTATC TGAAAAGTGGATTAAAAAAGATGAAGTTATTCCTTATTTCTATATATCAATCGATAAGTACACACATACCGTGACTCTAA GTAAAGTCAGTTTGAGGTGA
Upstream 100 bases:
>100_bases TATGATGCAGGTTACACCCTATAAATTTCATCCAAATGATGACACTGTTATTCGCACCAGTAAGAAAGCTGGAATCATCA CTCAATTGAGTAATTAGATA
Downstream 100 bases:
>100_bases TTTTTACAGAGTCAGATTTTTCATATCAGCTGATTGATAAATAATATAATGCTGTCATCGATATGATGAACAGTAATAAA ATTTCATTTTGACCGCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAESYYFIFTAQDGSQPRESSIVY RDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYFYISIDKYTHTVTLSKVSLR
Sequences:
>Translated_139_residues MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAESYYFIFTAQDGSQPRESSIVY RDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYFYISIDKYTHTVTLSKVSLR >Mature_139_residues MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAESYYFIFTAQDGSQPRESSIVY RDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYFYISIDKYTHTVTLSKVSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16270; Mature: 16270
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAES CHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCHHHHCCCCCCC YYFIFTAQDGSQPRESSIVYRDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYF EEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCCEEE YISIDKYTHTVTLSKVSLR EEEEECEEEEEEEEEEECC >Mature Secondary Structure MKILKRLIFICLVIIIIFFLIDCSMQKVAEGRDGYTRSNIWAYYLYTDKDIRSAPRAAES CHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEEECCHHHHCCCCCCC YYFIFTAQDGSQPRESSIVYRDDVCLSDVKNHLTTLGYRVSDHDGLSEKWIKKDEVIPYF EEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEECCCCCCHHHHCCCCCCCEEE YISIDKYTHTVTLSKVSLR EEEEECEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA