Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is yfhL [H]

Identifier: 170023440

GI number: 170023440

Start: 1329491

End: 1329676

Strand: Reverse

Name: yfhL [H]

Synonym: YPK_1194

Alternate gene names: 170023440

Gene position: 1329676-1329491 (Counterclockwise)

Preceding gene: 170023442

Following gene: 170023432

Centisome position: 28.35

GC content: 47.31

Gene sequence:

>186_bases
ATGGGTGCAGAAATCTATCAAATTGATCCGATGCGCTGTACTGAGTGTGTAGGTCATTACGAAACGCCAACCTGTCAGCT
GGTCTGCCCTATTGATAATACGATTTCTGCCGACCCTGCTTGGGTTGAGACTAACGAGCAGTTGTGGGATAAGTTTGTTC
AGCTACACCATGCCGATCGTCTGTAA

Upstream 100 bases:

>100_bases
AAGATTAAAAAGGTAAGTTACTGAAATGGCTTTATTGATTACTAAACGCTGTATCAACTGCGATATGTGCGAACCGGAAT
GCCCGAATGAGGCAATCTCC

Downstream 100 bases:

>100_bases
TACCGCTCGTCATACCTCCTCGCTCATATCAACAAGCCCAGTATGCAAAAAGGGATGGCATTTCCATACCCATCCCTTAA
ATTTTCGGCTATCACGCTCA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADRL

Sequences:

>Translated_61_residues
MGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADRL
>Mature_60_residues
GAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADRL

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=61, Percent_Identity=72.1311475409836, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7034; Mature: 6903

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADR
CCCCEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCC
L
C
>Mature Secondary Structure 
GAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLHHADR
CCCEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]