| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is aaeA [H]
Identifier: 170022735
GI number: 170022735
Start: 536098
End: 537033
Strand: Direct
Name: aaeA [H]
Synonym: YPK_0484
Alternate gene names: 170022735
Gene position: 536098-537033 (Clockwise)
Preceding gene: 170022734
Following gene: 170022736
Centisome position: 11.43
GC content: 52.78
Gene sequence:
>936_bases GTGAGTACATTTTCATTAAAAATAATCCGCGTTGGCATCACCGTCTTGGTGGTCGTACTGGCTGTTATCGCGATTTTCAA CGTGTGGGCCTTCTATACTGAATCGCCGTGGACCCGTGATGCTAAATTTACCGCAGACGTGGTCGCTATCGCACCGGATG TCAGCGGCTTACTGACCGAAGTACCGGTAAAAGACAACCAACTGGTGCAGAAAGGCCAGATTCTGTTTGTCATTGATCAA CCCCGTTATCAGCAGGCGTTGGCTGAAGCCGAGGCCGATGTGGCCTATTACCAGACCCTGGCTGCGGAGAAGCAACGGGA GTCCAGTAGGCGTCATCGCCTGGGTATTCAGGCGCTGTCACAAGAAGAGATTGACCAGGCAAGCAATGTGTTGCAAACCG TCCAGCATCAGTTGGCAAAAGCCATTGCCGTGCGGGATTTAGCCCGCCTTGATCTGGAAAGGACCACGGTACGTGCACCA GCAGAAGGGTGGGTGACCAACCTGAATGTACATGCTGGCGAGTTTATTAACCGTGGGGCCACGGCAGTCGCATTGGTGAA AAAAGATACTTTCTACATTTTAGCCTATCTGGAGGAGACGAAGCTCGAAGGGGTTAAACCGGGCTACCGAGCGGAAATTA CCCCGCTGGGCAGTAACCGCATCCTGCATGGTACGGTCGATAGCATTTCAGCCGGTGTTACCAATAGCAGTAGCAGTGCC GACAGCAAAGGGCTGGCGACCATTGATAATAATCTTGAATGGGTACGCTTGGCGCAACGGGTACCGGTGAAGATTCATCT GGATAGCGAAGACCAGCAATATTTGTATCCGGCGGGCACCACGGCCACGGTGGTGATCACCGGGCCGAATGATCGTGATC CTCATCAGGTATCGCCCATGACCAAGTTGATGCATCGTCTACGTGAGTTTGGCTAA
Upstream 100 bases:
>100_bases ACCGGTATTTACGAGTTTGTTTGGCACCCGGCTCTTTTTAATACGGCGCTGTATTGTTGCCTGTTTTATTTAACATCCCG TCTTTTTTCCTGAGGTCACA
Downstream 100 bases:
>100_bases TATGACCCACCCAAGCTTTATTCGCCTGCGGTTTGCGTTCAAGCTGAGTTTTGCCATTGTGGCGGCATTATTTCTTGGCT TTCATCTGCAATTGGAAACA
Product: p-hydroxybenzoic acid efflux subunit AaeA
Products: NA
Alternate protein names: pHBA efflux pump protein A [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSTFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQ PRYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALSQEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAP AEGWVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQVSPMTKLMHRLREFG
Sequences:
>Translated_311_residues MSTFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQ PRYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALSQEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAP AEGWVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQVSPMTKLMHRLREFG >Mature_310_residues STFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQP RYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALSQEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPA EGWVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSAD SKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQVSPMTKLMHRLREFG
Specific function: Unknown
COG id: COG1566
COG function: function code V; Multidrug resistance efflux pump
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789637, Length=311, Percent_Identity=72.6688102893891, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI87081951, Length=283, Percent_Identity=38.5159010600707, Blast_Score=204, Evalue=8e-54, Organism=Escherichia coli, GI1790519, Length=311, Percent_Identity=29.2604501607717, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788711, Length=309, Percent_Identity=25.2427184466019, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022871 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 34344; Mature: 34212
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTE CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHEE VPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALS CCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEHHHHHHCCC TAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA EEEEEEECCCEEEEEEEEHHHCCCCCCCCCEEEEECCCCCEEEECHHHHHCCCCCCCCCC DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQVSPM CCCCCEEECCCHHHHHHHHHCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCHH TKLMHRLREFG HHHHHHHHHCC >Mature Secondary Structure STFSLKIIRVGITVLVVVLAVIAIFNVWAFYTESPWTRDAKFTADVVAIAPDVSGLLTE CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHEE VPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALS CCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPAEGWVTNLNVHAGEFINRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEEHHHHHHCCC TAVALVKKDTFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSA EEEEEEECCCEEEEEEEEHHHCCCCCCCCCEEEEECCCCCEEEECHHHHHCCCCCCCCCC DSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQVSPM CCCCCEEECCCHHHHHHHHHCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCCCCCHH TKLMHRLREFG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA