Click here to switch to the map view.

The map label for this gene is 170022654

Identifier: 170022654

GI number: 170022654

Start: 439588

End: 441810

Strand: Direct

Name: 170022654

Synonym: YPK_0401

Alternate gene names: NA

Gene position: 439588-441810 (Clockwise)

Preceding gene: 170022653

Following gene: 170022655

Centisome position: 9.37

GC content: 57.58

Gene sequence:

>2223_bases
ATGTTTGCTCATGATAAAGCTAATAATAATAAAGCCGCGGACAAGACCGGCACGGTGACGCCGACCCATATCGTCTCGCC
GGAGGCCGCCCCAACCGTGAGTGGCGCTCAGATGACCGAGATAGCCGGGGGGATCGGGGATGCGGTGGGCGGCACTGCCG
GTAAGCGCATCAATCAGGCCGCCGAGGTGGCTAAAACTGCCCTGGATGCCAAGGCAAAAGTACTGGACGGCGGCGTCACG
CCGCTGAATCTGGCCGCGGGCGGGGCCGGGGCGGGATTGCCGGACAGCGTGGCGGCGGCGCTTACCCGCCTGGTCAAACA
GCCCTCAGGCCTGCAATTTACCCTGACGGCGGCCGGTTTACCGCCCCAGACCTTTGCGGTGGTGGATTTCACCCTGAGCG
AGATGCTCTCCTCGCCGTTTGTGCTCAATGTCGGGCTGGCGAGTGCCGATCCGGCGGTGGATTTTGCGGCGGTATTGGAT
GAAGACGCCACGCTGTTTATCTGGCGAGAAGGGGTACTGCAACGCAGCATCACCGGCATGGTCGCCAGCTTTGAACAGGG
TGATACCGGTTTTCATCAGACCCGCTACAGCATGGTGATCCGCCCGGCGCTGTGGCGCACCAGCCTGCGGCGCAATGCCC
GCATCTTCCAGCAGGCCTCGGTGGAAGAGATCATCACCACCCTGCTGAAAGAGAACGGCATCAACGATTTTGCTTTTGGT
TTTCGCCACCCGCACCCGGTGCGCGAGTTCTGCGTGCAATATCAGGAGTCCGATTTTGATTTTATCCAGCGCCTGACGGC
AGAAGAGGGGATTTTCTACTACTTCGAGTTCAGCGCCGGGAAAAATACCGTGGTGTATGCCGATGATGTTGGCTCCCTGC
CGAAAGGCGCGTCACTGCCCTATAACCCGAATGTGGCGGCGCAGGCGCAGGAACTGAGTATCACCACCTTCACCCGCAGT
GCGCAGGTGCGCCCGGCGATGGTGCAACTGAAAGACTACACCTTTAAAAACCCGAACTGGGCCGCGGCCTTCAGCGAACA
GTCGGGAGAACTGCAAAACCAGCGACCGGACTACGAGCATTTTGATTTTCCGGGGCGCTTCAAAGATGCCCAGCACGGGC
AGGATTTTACCCGCTACCGGCTGGACGCACTGCGCAATGACGCCAATCTGGGGCAGGGGGCGAGCAATGATTTTACCCTC
CAGCCGGGGCAGTTGTTCAGCCTGTACAACCACCCACGTAGTGACCTGAACCACGCCTGGCAGTTGCTCGGTATTCAGCA
CAGCGGCAAACAGATGCAGGCGCTGGAGCAGGCATCTGGCGATCAGGGCACGGTGCTGTTCAACCACTTCAGTTTTATTC
CGCACACCCAGACCTGGCGGCCGACGCCGTTGGCTAAACCGGCGATGGACGGCCCGCAGATCGCCATGGTGGTGGGGCCA
CCGGGGGAAGAGATTTACTGCGACGAATACGGCCGTATCCGCCTGCAATTTTTATGGGATCGCTACGGGCAGAGCAATGA
CAACAGCTCCTGCTGGATCCGGGTAACCCAGCCGTGGGCGGGCCAGGGCTGGGGCATGCTGGCCATTCCGCGTATTGGCC
AGGAAGTGGTGGTGGATTTTCTGCACGGCGATCCGGATCAACCGATTGTCACGGGGCGGACCTATCACGCCAACAACATC
CCGCCGGGGTCGTTACCGGCCAGTAAAACCCAGATGGCGTTCCGCTCAAAAACCCACAAAGGGGAAGGCTACAACGAAAT
GCGCTTCGAGGATGCCAAAGGCGGCGAAGGGCTGTTTATGCATGCGCAGAAAGATATGACGACCATGGTGCTGAATGATC
GCAAAACCGATGTGACTCAGGACCATTCAGAGCACATTGGGCAAGACCAGTCCGTGACGGTTGTGCGTAACCAAAGTAAT
ACGATCCAAAATGATCGCCGGGTGGAGGTGACTCGCGATCAACAAACCGAAGTGGGCAATGATTACCAGCTAGTGGTGAA
AGGTGAAAAGAAAGAGTTTGTGACGAAAATTCGTTACACCGAAGTGCATGAAGACGAAACGCTCACGGTGACGAAAAGTA
TTAAAATCCATGCCAAACAAGGTGATATCAGCATATCAACCCCGAATGCCGGAATTACGATCACCCATGACGGTGCCATT
ATTCTGCAAGGGAAATACATTCGTTTAGCGGCCGATATGATCGATCTTAATCCAGAGGAGTAG

Upstream 100 bases:

>100_bases
AAAACAAATTGATGACCGCTGGAATGCCTTACTCAGCCGTTATCACCACTTAACGCAGCAGACGAACTCTGCCCGTTAAC
CTCCAGGAGACAGCAACGCG

Downstream 100 bases:

>100_bases
CAGGGATGCCAGAAAATAACATCAACACTTACTGTATTCAGGAAGGAACGCTGGAATGTCCAGAGGGTTTCACTGACCGT
ACGGTGAACCTCTTTATGAA

Product: type VI secretion system Vgr family protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 740; Mature: 740

Protein sequence:

>740_residues
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEIAGGIGDAVGGTAGKRINQAAEVAKTALDAKAKVLDGGVT
PLNLAAGGAGAGLPDSVAAALTRLVKQPSGLQFTLTAAGLPPQTFAVVDFTLSEMLSSPFVLNVGLASADPAVDFAAVLD
EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS
AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL
QPGQLFSLYNHPRSDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI
PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMTTMVLNDRKTDVTQDHSEHIGQDQSVTVVRNQSN
TIQNDRRVEVTRDQQTEVGNDYQLVVKGEKKEFVTKIRYTEVHEDETLTVTKSIKIHAKQGDISISTPNAGITITHDGAI
ILQGKYIRLAADMIDLNPEE

Sequences:

>Translated_740_residues
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEIAGGIGDAVGGTAGKRINQAAEVAKTALDAKAKVLDGGVT
PLNLAAGGAGAGLPDSVAAALTRLVKQPSGLQFTLTAAGLPPQTFAVVDFTLSEMLSSPFVLNVGLASADPAVDFAAVLD
EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS
AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL
QPGQLFSLYNHPRSDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI
PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMTTMVLNDRKTDVTQDHSEHIGQDQSVTVVRNQSN
TIQNDRRVEVTRDQQTEVGNDYQLVVKGEKKEFVTKIRYTEVHEDETLTVTKSIKIHAKQGDISISTPNAGITITHDGAI
ILQGKYIRLAADMIDLNPEE
>Mature_740_residues
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEIAGGIGDAVGGTAGKRINQAAEVAKTALDAKAKVLDGGVT
PLNLAAGGAGAGLPDSVAAALTRLVKQPSGLQFTLTAAGLPPQTFAVVDFTLSEMLSSPFVLNVGLASADPAVDFAAVLD
EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS
AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL
QPGQLFSLYNHPRSDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI
PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMTTMVLNDRKTDVTQDHSEHIGQDQSVTVVRNQSN
TIQNDRRVEVTRDQQTEVGNDYQLVVKGEKKEFVTKIRYTEVHEDETLTVTKSIKIHAKQGDISISTPNAGITITHDGAI
ILQGKYIRLAADMIDLNPEE

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81510; Mature: 81510

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00154 ATPASE_E1_E2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEIAGGIGDAVGGTAGKRINQA
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCHHCCCCCHHHHHHH
AEVAKTALDAKAKVLDGGVTPLNLAAGGAGAGLPDSVAAALTRLVKQPSGLQFTLTAAGL
HHHHHHHHHCHHHEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
PPQTFAVVDFTLSEMLSSPFVLNVGLASADPAVDFAAVLDEDATLFIWREGVLQRSITGM
CCCEEEEEHEEHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHH
VASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
HHHCCCCCCCHHHHEEHEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHC
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLP
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCC
YNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEH
CCCCCCCCHHEEEEEEEECCCCCCCEEEEEECCEECCCCEEEEECCCCCCCCCCCCCCCC
FDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTLQPGQLFSLYNHPRSDLNHAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHE
QLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
EEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDF
CCCEEEECCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHH
LHGDPDQPIVTGRTYHANNIPPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFM
HCCCCCCCEEECCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEE
HAQKDMTTMVLNDRKTDVTQDHSEHIGQDQSVTVVRNQSNTIQNDRRVEVTRDQQTEVGN
EECCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC
DYQLVVKGEKKEFVTKIRYTEVHEDETLTVTKSIKIHAKQGDISISTPNAGITITHDGAI
CEEEEEECCHHHHHHHEEEEEECCCCEEEEEEEEEEEEECCCEEEECCCCCEEEEECCEE
ILQGKYIRLAADMIDLNPEE
EEECCEEEEEEEHCCCCCCC
>Mature Secondary Structure
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEIAGGIGDAVGGTAGKRINQA
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCHHCCCCCHHHHHHH
AEVAKTALDAKAKVLDGGVTPLNLAAGGAGAGLPDSVAAALTRLVKQPSGLQFTLTAAGL
HHHHHHHHHCHHHEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
PPQTFAVVDFTLSEMLSSPFVLNVGLASADPAVDFAAVLDEDATLFIWREGVLQRSITGM
CCCEEEEEHEEHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHH
VASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
HHHCCCCCCCHHHHEEHEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHC
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLP
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCC
YNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEH
CCCCCCCCHHEEEEEEEECCCCCCCEEEEEECCEECCCCEEEEECCCCCCCCCCCCCCCC
FDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTLQPGQLFSLYNHPRSDLNHAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHE
QLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
EEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDF
CCCEEEECCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHH
LHGDPDQPIVTGRTYHANNIPPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFM
HCCCCCCCEEECCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEE
HAQKDMTTMVLNDRKTDVTQDHSEHIGQDQSVTVVRNQSNTIQNDRRVEVTRDQQTEVGN
EECCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCC
DYQLVVKGEKKEFVTKIRYTEVHEDETLTVTKSIKIHAKQGDISISTPNAGITITHDGAI
CEEEEEECCHHHHHHHEEEEEECCCCEEEEEEEEEEEEECCCEEEECCCCCEEEEECCEE
ILQGKYIRLAADMIDLNPEE
EEECCEEEEEEEHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA