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The map label for this gene is 170022653

Identifier: 170022653

GI number: 170022653

Start: 438259

End: 439566

Strand: Direct

Name: 170022653

Synonym: YPK_0400

Alternate gene names: NA

Gene position: 438259-439566 (Clockwise)

Preceding gene: 170022652

Following gene: 170022654

Centisome position: 9.35

GC content: 57.87

Gene sequence:

>1308_bases
ATGAGTGACACCCCGCAACATATCATCATTAAAACCGGCACTGACCCACGGAACCGGCCGGAATTTAACGCCATTCGTGA
AGAGATCAACAAAATCAACCACCCGGCACGGCCAGAGGTCAACTGGGGTTTGATTGAATCACTGGCGCTGACCCTGTTCC
GTACCCACGGCGTGGATTTGCAGACGGCGGTGTATTACACGCTGGCCCGCACCCAAAAAAATGGCCTGGCCGGTTTCACC
GAGGGCTGCGAGTTGCTGGCCGGTATGGTGGTCGGCCAGTGGGATCACCTGTGGCCGGAACAGCCGCAGGCACGCAGTGA
AATACTGGAATGGTTCAATACCCGCGTCAGCAATCAACTGCGTCAGCATGATTTTACCCGTGACGATCTTCGGCTAGTGT
ACCGCGCCGAGCGGGCCTTGCAGTTGCTGTACGATAAATTGCAACAGGTTGAATTAAAAAGGGTACCGCGCATTGAAAAC
CTGCTGTACCTGATGCAGAACACCGCCAAAAAACTCGAATCGGCCAGTGACGCGGCGAAGGCTCAGCAAACTGCGGCCCC
GCTGAAAATGCCGCCTATGGTCTATCTCTCGGTACCCGAGGCCGAGCCTGTCCGGACGGCAGCCCCTGAGCCTGCGGCCA
ATATTGAGGTGCGTTCGCCCCCCCCGGAGACCAAACGGGGGGCGGTGCTGTGGGGCTTTGGTGCCGGTGTCCTGTGTAGT
TTACTGGTGGCGACTGCGGTTTACGTTACCCAGTTCAAACCGCTGCAACAGCAAATGACGGTGCTGGCCACCCAACCGGA
AAGCGCGGCATTGCTGTGGCTCAACCGCCCGGATGTCGCCACCTATGGTGAGCAACTGAGCACCCTGGAAAACCTCTCGC
CCCTGTTTGTGCTCAATACCGCCGACCAGTCGGTGGCGATGGCTCGTCAACGCTGGCCGTCCGATCCCAGTCAGGTGGCC
GAAAGCCAGCGCTGGGCGCGGTTGGTGGAGGCGCGTATCGGCCTGGCCGGTACCGACAGCAGCTATTTCCAGCTCCAGCA
GCGCTTGCATGCGCTGTCTGAAAAATTACTCGAACAGGAACGTTCTCGGGGCAGTCTGACCATCTCCTATCTAAAAACAG
CAGTTTACCAGATGCAGACCGAGCTGAACCGGGAGATACCGCTGGAGGAGTTACTGCGCCAGTTGGCGGTGTCCGCCGAT
GAACATCAACCGGCCTCGCCGGTCTTGATAAAACAAATTGATGACCGCTGGAATGCCTTACTCAGCCGTTATCACCACTT
AACGCAGCAGACGAACTCTGCCCGTTAA

Upstream 100 bases:

>100_bases
TCGCATTGAAACAGATGCATTGAGGCAAATCGTATTAATCGTTGTCATCACGTCTTCCTGCTGCTTAGGCGGCAGGAGGG
CGATCAAAGGATGAGTCTGC

Downstream 100 bases:

>100_bases
CCTCCAGGAGACAGCAACGCGATGTTTGCTCATGATAAAGCTAATAATAATAAAGCCGCGGACAAGACCGGCACGGTGAC
GCCGACCCATATCGTCTCGC

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Protein VasL; Type VI Secretion System Protein VasJ

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDLQTAVYYTLARTQKNGLAGFT
EGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQLRQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIEN
LLYLMQNTAKKLESASDAAKAQQTAAPLKMPPMVYLSVPEAEPVRTAAPEPAANIEVRSPPPETKRGAVLWGFGAGVLCS
LLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQVA
ESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSAD
EHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR

Sequences:

>Translated_435_residues
MSDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDLQTAVYYTLARTQKNGLAGFT
EGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQLRQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIEN
LLYLMQNTAKKLESASDAAKAQQTAAPLKMPPMVYLSVPEAEPVRTAAPEPAANIEVRSPPPETKRGAVLWGFGAGVLCS
LLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQVA
ESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSAD
EHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR
>Mature_434_residues
SDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDLQTAVYYTLARTQKNGLAGFTE
GCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQLRQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIENL
LYLMQNTAKKLESASDAAKAQQTAAPLKMPPMVYLSVPEAEPVRTAAPEPAANIEVRSPPPETKRGAVLWGFGAGVLCSL
LVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQVAE
SQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADE
HQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49239; Mature: 49107

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDL
CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
QTAVYYTLARTQKNGLAGFTEGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
RQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIENLLYLMQNTAKKLESASDAAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AQQTAAPLKMPPMVYLSVPEAEPVRTAAPEPAANIEVRSPPPETKRGAVLWGFGAGVLCS
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCHHHHHH
LLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC
ADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWNAL
HCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LSRYHHLTQQTNSAR
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDTPQHIIIKTGTDPRNRPEFNAIREEINKINHPARPEVNWGLIESLALTLFRTHGVDL
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
QTAVYYTLARTQKNGLAGFTEGCELLAGMVVGQWDHLWPEQPQARSEILEWFNTRVSNQL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
RQHDFTRDDLRLVYRAERALQLLYDKLQQVELKRVPRIENLLYLMQNTAKKLESASDAAK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AQQTAAPLKMPPMVYLSVPEAEPVRTAAPEPAANIEVRSPPPETKRGAVLWGFGAGVLCS
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCHHHHHH
LLVATAVYVTQFKPLQQQMTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC
ADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWNAL
HCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
LSRYHHLTQQTNSAR
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA