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The map label for this gene is 170022647

Identifier: 170022647

GI number: 170022647

Start: 428317

End: 429084

Strand: Direct

Name: 170022647

Synonym: YPK_0394

Alternate gene names: NA

Gene position: 428317-429084 (Clockwise)

Preceding gene: 170022646

Following gene: 170022648

Centisome position: 9.13

GC content: 50.0

Gene sequence:

>768_bases
ATGAAAACAGATGCTGTGACTGACAACACCCCTTTCCCCGCAGCGGAAGCGGTCACCTCCCATCGGCAGTATCAGCTACC
GCTACGTGGCGAAAGCTTGAACGCGATGATCGATACCGCCACCCCATTATTGGGGATGGTACTGCGCCTGAAAGACATGG
AAAACCAAGCGTTACCGGACCAGCTATATCAGCAGGTGGTGACGGATATCCGTGCTATTGAGCAGTACTTGCAAACCAAA
GGCTACGAACCCGGCGCAATCATATCTTTCCGATATGTGCTGTGCACATTCATCGATGAAACGGCATTAGGGCATGGCTG
GAACACCCAAAACGGTTGGTTACAGCAATCTCTGTTGGTGCATTTTCATAATGAAACCTGGGGCGGAGAGAAAGTGTACG
TCCTGTTGGAACGCTTAATGGGGGAACCCAAGCGTTACCAAGACCTGCTGGAGTTTATCTATCTCTGTTTTTGTTTGGGT
TACCGCGGCCGCTACAAAGTGACATCACAAAACGGTGATGACTTTGAGCGATTGTTCCGCCGATTGCATCATCAATTACA
GCAGTTACGGGGTGATGCGCCGCCGACGGTCCTTTATCAAGGGGGCGGCCGTCTGAATAGCCGCTACCACTTGAGTAAGC
GGTTGACTATCAAGCATTTGTTATGGGGTGGCGTGAGTCTGCTGGTGGTGATTTATCTGTTTTATGCCATCCACCTGCAC
ACCCAAAGTCAGGATATTTTGCAACAGCTAAACAATTTATTGAGCTAG

Upstream 100 bases:

>100_bases
CTGTATGGAAAGAAATCCAGCAAAGCAATGCGATTGCCTTCCACGTCTCGGGTGATTTCCCTGATCTGGACATGCAATTC
TGGGCAATCAGGAGCAGCTA

Downstream 100 bases:

>100_bases
GAAAGCACAAATGATTCAAATTGACTTGCCCACACTCGTAAACCGCCTTAATCCCATTGCCCGCCATTCTCTGGAAGCGG
CGGCGGCGCATTGCGTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein; Type IV / VI Secretion System Protein; DotU Family Type IV/VI Secretion System Protein; Type IV/VI Secretion System Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Core Protein; Type VI Secretion System OmpA/MotB Family Protein; SciP Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; DotU Family Type IV / VI Secretion System Protein; Outer Membrane Porin Involved In Nitrogen Fixation; OmpA/MotB Domain Protein; Type VI Secretion System Protein ImpK; Aspartyl/Glutamyl-TRNA(Asn/Gln) Amidotransferase Subunit B; OmpA-Family Protein; Outer Membrane Protein Ompa/Motb Family; OmpA-Like Porin; OmpA/MotB; Flagellar Motor Protein; Type IV / VI Secretion System Family Protein DotU; Type VI Secretion System VasF

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKTDAVTDNTPFPAAEAVTSHRQYQLPLRGESLNAMIDTATPLLGMVLRLKDMENQALPDQLYQQVVTDIRAIEQYLQTK
GYEPGAIISFRYVLCTFIDETALGHGWNTQNGWLQQSLLVHFHNETWGGEKVYVLLERLMGEPKRYQDLLEFIYLCFCLG
YRGRYKVTSQNGDDFERLFRRLHHQLQQLRGDAPPTVLYQGGGRLNSRYHLSKRLTIKHLLWGGVSLLVVIYLFYAIHLH
TQSQDILQQLNNLLS

Sequences:

>Translated_255_residues
MKTDAVTDNTPFPAAEAVTSHRQYQLPLRGESLNAMIDTATPLLGMVLRLKDMENQALPDQLYQQVVTDIRAIEQYLQTK
GYEPGAIISFRYVLCTFIDETALGHGWNTQNGWLQQSLLVHFHNETWGGEKVYVLLERLMGEPKRYQDLLEFIYLCFCLG
YRGRYKVTSQNGDDFERLFRRLHHQLQQLRGDAPPTVLYQGGGRLNSRYHLSKRLTIKHLLWGGVSLLVVIYLFYAIHLH
TQSQDILQQLNNLLS
>Mature_255_residues
MKTDAVTDNTPFPAAEAVTSHRQYQLPLRGESLNAMIDTATPLLGMVLRLKDMENQALPDQLYQQVVTDIRAIEQYLQTK
GYEPGAIISFRYVLCTFIDETALGHGWNTQNGWLQQSLLVHFHNETWGGEKVYVLLERLMGEPKRYQDLLEFIYLCFCLG
YRGRYKVTSQNGDDFERLFRRLHHQLQQLRGDAPPTVLYQGGGRLNSRYHLSKRLTIKHLLWGGVSLLVVIYLFYAIHLH
TQSQDILQQLNNLLS

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29454; Mature: 29454

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHCC
>Mature Secondary Structure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CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA