Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
---|---|
Accession | NC_010470 |
Length | 38,713 |
Click here to switch to the map view.
The map label for this gene is 170016334
Identifier: 170016334
GI number: 170016334
Start: 20172
End: 20489
Strand: Direct
Name: 170016334
Synonym: LCK_p100027
Alternate gene names: NA
Gene position: 20172-20489 (Clockwise)
Preceding gene: 170016333
Following gene: 170016335
Centisome position: 52.11
GC content: 37.11
Gene sequence:
>318_bases ATGAAGTATAAATATCTAACTTTGTTACCACACGGGACGAATGGTAGAACGTATGACTCCAGTTATGCGTTTTTATTTTG TCGTTTTGATGAGATAACAGATGAGGTTGATCAGGCGCAAACATATTTAATTCAAGCGGACAAATTACCGCCAAAATTAG AGATGTTAGATATTGTTGTGCCTGAAAAAGTTTATCAGGAGGGAGGTGGCGATTGGGTGATGTCATTTAAACCTGTTGAT AATAACCAACGTATTGAACGATTGGAATATTGGAAAGACATTGCCGAACGGTTAAGGTATGTCAGAGAATTACACTAA
Upstream 100 bases:
>100_bases TGGGGGAGTAGGTCTCAATATGAATATCCATTACGAGGCAAAACTGTAATAAATGCCCCTTTGATGAGGATATTATAATT AAAGTCCTAAAGGAGTTGAT
Downstream 100 bases:
>100_bases TTTAAGTTTTGAACAGATGTCAGGACACGATTTAATAGCATTTCGAGAGCATTATAATTTATCCCGACTTCAAATGGCTT CATTTATGATGATTTCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MKYKYLTLLPHGTNGRTYDSSYAFLFCRFDEITDEVDQAQTYLIQADKLPPKLEMLDIVVPEKVYQEGGGDWVMSFKPVD NNQRIERLEYWKDIAERLRYVRELH
Sequences:
>Translated_105_residues MKYKYLTLLPHGTNGRTYDSSYAFLFCRFDEITDEVDQAQTYLIQADKLPPKLEMLDIVVPEKVYQEGGGDWVMSFKPVD NNQRIERLEYWKDIAERLRYVRELH >Mature_105_residues MKYKYLTLLPHGTNGRTYDSSYAFLFCRFDEITDEVDQAQTYLIQADKLPPKLEMLDIVVPEKVYQEGGGDWVMSFKPVD NNQRIERLEYWKDIAERLRYVRELH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12553; Mature: 12553
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKYLTLLPHGTNGRTYDSSYAFLFCRFDEITDEVDQAQTYLIQADKLPPKLEMLDIVV CCCEEEEEEEECCCCCEECCCEEEEEEEHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEC PEKVYQEGGGDWVMSFKPVDNNQRIERLEYWKDIAERLRYVRELH CHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYKYLTLLPHGTNGRTYDSSYAFLFCRFDEITDEVDQAQTYLIQADKLPPKLEMLDIVV CCCEEEEEEEECCCCCEECCCEEEEEEEHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEC PEKVYQEGGGDWVMSFKPVDNNQRIERLEYWKDIAERLRYVRELH CHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA