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The map label for this gene is 169833764

Identifier: 169833764

GI number: 169833764

Start: 443536

End: 443658

Strand: Direct

Name: 169833764

Synonym: SPH_0487

Alternate gene names: NA

Gene position: 443536-443658 (Clockwise)

Preceding gene: 169832688

Following gene: 169834117

Centisome position: 19.75

GC content: 45.53

Gene sequence:

>123_bases
ATGACGACAGGTTGGTTCCAGGTCAATGGCAGATGGTACTACGCTTATAGCTCAGGTGCCTTGGCAGTGAATACGACTGT
AGATGGCTATTCTGTCAACTATAATGGCGAATGGGTTCAATAA

Upstream 100 bases:

>100_bases
TAATGAGACTTTGTACGTAACTAAAACAGGTTGTCAATGGCGCATGCCCCCTCACGACTTTCCTCTTTACTTAACGGTAT
GGAGTTTCTTTCGTCGTTCT

Downstream 100 bases:

>100_bases
TGAAAGAAGCGATTGTGAATGGAAACAATCGCTTTTTTTGTGAAAATATAATAAAATAGATAGGAAAGAATTAATACTTG
TATGAAAAATAAGACGTTTT

Product: choline-binding protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 39

Protein sequence:

>40_residues
MTTGWFQVNGRWYYAYSSGALAVNTTVDGYSVNYNGEWVQ

Sequences:

>Translated_40_residues
MTTGWFQVNGRWYYAYSSGALAVNTTVDGYSVNYNGEWVQ
>Mature_39_residues
TTGWFQVNGRWYYAYSSGALAVNTTVDGYSVNYNGEWVQ

Specific function: Unknown

COG id: COG5263

COG function: function code R; FOG: Glucan-binding domain (YG repeat)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4557; Mature: 4426

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGWFQVNGRWYYAYSSGALAVNTTVDGYSVNYNGEWVQ
CCCCEEEECCEEEEEECCCCEEEEEECCCEEECCCCEEEC
>Mature Secondary Structure 
TTGWFQVNGRWYYAYSSGALAVNTTVDGYSVNYNGEWVQ
CCCEEEECCEEEEEECCCCEEEEEECCCEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA