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The map label for this gene is yisS [H]

Identifier: 169824282

GI number: 169824282

Start: 647064

End: 648083

Strand: Direct

Name: yisS [H]

Synonym: FMG_0585

Alternate gene names: 169824282

Gene position: 647064-648083 (Clockwise)

Preceding gene: 169824281

Following gene: 169824283

Centisome position: 36.0

GC content: 33.73

Gene sequence:

>1020_bases
ATGCAAAAAATTAAATGTGCAATCATTGGTTGCGGTAGAATTTCTTATAAACACGTAGAAGGAATTGCAAACAACGATTC
AGAAATAGAATTAGTTGCAGTATGCGATATTATTGAAGAAAGAGCCATAGAAAAAAGAGATGAATATTTGGAAAGATTTC
CTGACAGAGATGTAAAAGTATACACAGATTACAAAAAAATGTTAGAGGAAGTCGACATCGATATGTGTTCTATTTCAACA
GAAAGTGGATATCATGGTAAAATAGCTCTTCACTGCTTAGAAAAATCAAAACACGTTTTGATTGAAAAACCAATGGCTAT
GAGCTTGGAAGAAATTGACAAAATTAATAAATTAGCTGATGAAAAAGGATTAAAAGTTGGGGTGTGTCACCAAAACAGAT
TTAATCCTCCAATTCAAAAATTGAAAAAGACAATTGATGCTAATAAATTTGGAAAGATGACAAACATCACAGCAAGAGTT
TTATGGAACAGAAATCAAAACTACTATAACTTAGCACCATGGAGAGGAACAAAGGCGCTAGACGGTGGTACATTGATGAA
TCAATGCATACACGCACTAGACTTATTGTTGTGGATGATGGACGATGAATTAGTAAGCGTAAAAGCTGAGACTGAAACTT
TCTTAAGAGACATAGAAATGGAAGATTACGGCGTAATTTTGATGAGATTTAAGAGCGGTAGAATTGGATTATTAGAAGGT
AGTGCCGATGTTTATCCTAAAAATCTTGAAGAAACTATTTCTGTGTTTGGTTCAACAGGAACTGCTGTTATCGGTGGATT
AGCTGTCAATGAAATCAAAACTTGGGTATTTGAAGACGAATCTGAGACTGGAGAATTAAAAGATGATAAATCAATCGACA
ATGTGTACGGAAATGGACACACTCCATTATACAAAGATTTTATTCACGCAATAAATACAGATACTCAACCTTTAATTAAT
GGTCATGAAGGAAGAAAACCAGTTGAAGTATTAATGAAAGCTTACGGCTGGATTGACTAA

Upstream 100 bases:

>100_bases
AAATGGTTGTAGACAATGCACCATTTGTATTTGATACAAAATACGCTACAAGAGACGTAGAAAACAATAGAGATAAAATA
GAATTATTATAAGAGGTAAT

Downstream 100 bases:

>100_bases
TATAACAAATTTAATATTTTAAAAGCAAACAAGCTCTTGATTTTAATCAAGAGCTTGTTTTAATTTAACGAAAATTTTTA
AGCTCTATTATTTAAGTGAG

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQKIKCAIIGCGRISYKHVEGIANNDSEIELVAVCDIIEERAIEKRDEYLERFPDRDVKVYTDYKKMLEEVDIDMCSIST
ESGYHGKIALHCLEKSKHVLIEKPMAMSLEEIDKINKLADEKGLKVGVCHQNRFNPPIQKLKKTIDANKFGKMTNITARV
LWNRNQNYYNLAPWRGTKALDGGTLMNQCIHALDLLLWMMDDELVSVKAETETFLRDIEMEDYGVILMRFKSGRIGLLEG
SADVYPKNLEETISVFGSTGTAVIGGLAVNEIKTWVFEDESETGELKDDKSIDNVYGNGHTPLYKDFIHAINTDTQPLIN
GHEGRKPVEVLMKAYGWID

Sequences:

>Translated_339_residues
MQKIKCAIIGCGRISYKHVEGIANNDSEIELVAVCDIIEERAIEKRDEYLERFPDRDVKVYTDYKKMLEEVDIDMCSIST
ESGYHGKIALHCLEKSKHVLIEKPMAMSLEEIDKINKLADEKGLKVGVCHQNRFNPPIQKLKKTIDANKFGKMTNITARV
LWNRNQNYYNLAPWRGTKALDGGTLMNQCIHALDLLLWMMDDELVSVKAETETFLRDIEMEDYGVILMRFKSGRIGLLEG
SADVYPKNLEETISVFGSTGTAVIGGLAVNEIKTWVFEDESETGELKDDKSIDNVYGNGHTPLYKDFIHAINTDTQPLIN
GHEGRKPVEVLMKAYGWID
>Mature_339_residues
MQKIKCAIIGCGRISYKHVEGIANNDSEIELVAVCDIIEERAIEKRDEYLERFPDRDVKVYTDYKKMLEEVDIDMCSIST
ESGYHGKIALHCLEKSKHVLIEKPMAMSLEEIDKINKLADEKGLKVGVCHQNRFNPPIQKLKKTIDANKFGKMTNITARV
LWNRNQNYYNLAPWRGTKALDGGTLMNQCIHALDLLLWMMDDELVSVKAETETFLRDIEMEDYGVILMRFKSGRIGLLEG
SADVYPKNLEETISVFGSTGTAVIGGLAVNEIKTWVFEDESETGELKDDKSIDNVYGNGHTPLYKDFIHAINTDTQPLIN
GHEGRKPVEVLMKAYGWID

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=209, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38470; Mature: 38470

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIKCAIIGCGRISYKHVEGIANNDSEIELVAVCDIIEERAIEKRDEYLERFPDRDVKV
CCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEE
YTDYKKMLEEVDIDMCSISTESGYHGKIALHCLEKSKHVLIEKPMAMSLEEIDKINKLAD
EHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEECCCCCEEEECCHHCCHHHHHHHHHHHH
EKGLKVGVCHQNRFNPPIQKLKKTIDANKFGKMTNITARVLWNRNQNYYNLAPWRGTKAL
HCCCEEEEECCCCCCCHHHHHHHHHCHHHCCCHHCEEEEEEECCCCCEEEECCCCCCCCC
DGGTLMNQCIHALDLLLWMMDDELVSVKAETETFLRDIEMEDYGVILMRFKSGRIGLLEG
CCHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEC
SADVYPKNLEETISVFGSTGTAVIGGLAVNEIKTWVFEDESETGELKDDKSIDNVYGNGH
CCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHEEECCCCCCCCCCCCCCHHHCCCCCC
TPLYKDFIHAINTDTQPLINGHEGRKPVEVLMKAYGWID
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQKIKCAIIGCGRISYKHVEGIANNDSEIELVAVCDIIEERAIEKRDEYLERFPDRDVKV
CCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEE
YTDYKKMLEEVDIDMCSISTESGYHGKIALHCLEKSKHVLIEKPMAMSLEEIDKINKLAD
EHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEECCCCCEEEECCHHCCHHHHHHHHHHHH
EKGLKVGVCHQNRFNPPIQKLKKTIDANKFGKMTNITARVLWNRNQNYYNLAPWRGTKAL
HCCCEEEEECCCCCCCHHHHHHHHHCHHHCCCHHCEEEEEEECCCCCEEEECCCCCCCCC
DGGTLMNQCIHALDLLLWMMDDELVSVKAETETFLRDIEMEDYGVILMRFKSGRIGLLEG
CCHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEC
SADVYPKNLEETISVFGSTGTAVIGGLAVNEIKTWVFEDESETGELKDDKSIDNVYGNGH
CCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHEEECCCCCCCCCCCCCCHHHCCCCCC
TPLYKDFIHAINTDTQPLINGHEGRKPVEVLMKAYGWID
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]