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The map label for this gene is ycaM [H]

Identifier: 169824198

GI number: 169824198

Start: 565077

End: 566537

Strand: Direct

Name: ycaM [H]

Synonym: FMG_0501

Alternate gene names: 169824198

Gene position: 565077-566537 (Clockwise)

Preceding gene: 169824197

Following gene: 169824199

Centisome position: 31.44

GC content: 33.4

Gene sequence:

>1461_bases
ATGAAAAACGATGTTTTAATTGATGATCAAAAGAAGAAATCGCTTACAGTGACCAATCTTATTTGGATGGGATTCACAGT
TGTATGGGGTTTCGGAAATGTTGTTAATAACTATGCAAACCAAGGTTTAGCAGTTATTACAAGCTGGATATTCATAATGG
CTTTGTATTTTATACCATATTCATTAATGGTAGGAGAACTTGGTTCGACTTTCAAAGAAGGACAATCAGGACTTAGCTAT
TGGATAAAACAAACTATGGGACCATTACTAGCTTATTTGTCCGGCTGGACTTATTGGGTAGTACATATCCCATATTTAGC
ACAAAAACCACAAAACTTAATGGTTGCAGGTTCATGGGCGATTTTTAGAAATCCTAAAATGGTAAAATCTTTAAATCCAA
TTGTACTACAAACATTAGTACTAATAATATTTTTGTTATTCGTGCTTTTAGCTGCAAATGGTATTAAATCTATAAAAGTT
TTAGGATCAATCGCTGGTACTGCAAGTTTTGTGATGGGTATTTTATTTATTTTATTAATGTTGGCAGCTCCAGCTTTAAG
AGGAGTAGAAGTTGCATCTCCAAATATGACGAGTATCAAAACTTATCTGCCTAACTTTAATTTGCATTATTTAACCACAA
TATCCATGCTAGTATTTGCCGTAGGAGGTTGTGAAAAAATCTCACCTTATGTAAATGATACACAAGATGCTGGTAAGAAC
TTCCCAAAAGCTATGATAATAATGGCTTTAATGGTAACAGTATCTGCGATTTTGGGTTCAGTTGCAATGGGAATGATGTT
CGATACAACAAATGTTGCAAACGACTTAAAAATGAACGGTGCATACTACGCGTTTGAAAAATTGGGACAATATTATGGAA
TAGGTCCATCACTTGTTATTATCTATGCGTTGACAAATTTCGCTGGACAAGCAGCAGCTTTGGTTATGAGTATTGATGCA
CCACTTAAACTTTTATTAAGTGAAGCAGATGCAAAATACGTTCCAAATTTCTTGAGAAAAATCAACGACAAAAAAGTTCC
AGTTGGTGGATACAAACTAACTACAATTTTGGTTAGTATTTTGATTATTATTCCAGCTTTGGGAATTGGAAACTCAAACG
AATTGTACAACTGGTTATTGGATTTGAACTCAATAGTAATGCCAATGCGTTACATGTGGGTATTCGCGGCATATTTTGCA
TTAAAACACTATCTAAATGAAAAACAAGGTGTAGAATACAAGTTCACAAAATCAAAATCATTTGGAAAAATTATTTCTGG
TTGGTGTTTCGCGTTTACAGCTTTTGCATGTATATTAGGTATGATTCCAAAAGAAGGAGAACCATTCACAAGTCAATGGA
ATTTCAAATTAATTCTAAACATTTTGACTCCAGTCGTATTGTTGGGATTGGGACTAATATTACCATCAATTGCTAGAAAA
GAACAAGCAAAAAATAATTAA

Upstream 100 bases:

>100_bases
AATAAAATAACAATGGCTTCCAGTAAATCTGGAGGCTATTTTTATTGCAAAATGTTTCAAATGAAGATAAATTTTGTTAT
AATCTATTTAGGAGGGAAAT

Downstream 100 bases:

>100_bases
AAATTTTTATAATCTAATCAAAGAAAGCTTCATTTATTTTTTAAATGAGGCTTTTTGATTGTTGAATTTTCTTATATTTT
CTTAATTGAAATTCACAAAT

Product: putative amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MKNDVLIDDQKKKSLTVTNLIWMGFTVVWGFGNVVNNYANQGLAVITSWIFIMALYFIPYSLMVGELGSTFKEGQSGLSY
WIKQTMGPLLAYLSGWTYWVVHIPYLAQKPQNLMVAGSWAIFRNPKMVKSLNPIVLQTLVLIIFLLFVLLAANGIKSIKV
LGSIAGTASFVMGILFILLMLAAPALRGVEVASPNMTSIKTYLPNFNLHYLTTISMLVFAVGGCEKISPYVNDTQDAGKN
FPKAMIIMALMVTVSAILGSVAMGMMFDTTNVANDLKMNGAYYAFEKLGQYYGIGPSLVIIYALTNFAGQAAALVMSIDA
PLKLLLSEADAKYVPNFLRKINDKKVPVGGYKLTTILVSILIIIPALGIGNSNELYNWLLDLNSIVMPMRYMWVFAAYFA
LKHYLNEKQGVEYKFTKSKSFGKIISGWCFAFTAFACILGMIPKEGEPFTSQWNFKLILNILTPVVLLGLGLILPSIARK
EQAKNN

Sequences:

>Translated_486_residues
MKNDVLIDDQKKKSLTVTNLIWMGFTVVWGFGNVVNNYANQGLAVITSWIFIMALYFIPYSLMVGELGSTFKEGQSGLSY
WIKQTMGPLLAYLSGWTYWVVHIPYLAQKPQNLMVAGSWAIFRNPKMVKSLNPIVLQTLVLIIFLLFVLLAANGIKSIKV
LGSIAGTASFVMGILFILLMLAAPALRGVEVASPNMTSIKTYLPNFNLHYLTTISMLVFAVGGCEKISPYVNDTQDAGKN
FPKAMIIMALMVTVSAILGSVAMGMMFDTTNVANDLKMNGAYYAFEKLGQYYGIGPSLVIIYALTNFAGQAAALVMSIDA
PLKLLLSEADAKYVPNFLRKINDKKVPVGGYKLTTILVSILIIIPALGIGNSNELYNWLLDLNSIVMPMRYMWVFAAYFA
LKHYLNEKQGVEYKFTKSKSFGKIISGWCFAFTAFACILGMIPKEGEPFTSQWNFKLILNILTPVVLLGLGLILPSIARK
EQAKNN
>Mature_486_residues
MKNDVLIDDQKKKSLTVTNLIWMGFTVVWGFGNVVNNYANQGLAVITSWIFIMALYFIPYSLMVGELGSTFKEGQSGLSY
WIKQTMGPLLAYLSGWTYWVVHIPYLAQKPQNLMVAGSWAIFRNPKMVKSLNPIVLQTLVLIIFLLFVLLAANGIKSIKV
LGSIAGTASFVMGILFILLMLAAPALRGVEVASPNMTSIKTYLPNFNLHYLTTISMLVFAVGGCEKISPYVNDTQDAGKN
FPKAMIIMALMVTVSAILGSVAMGMMFDTTNVANDLKMNGAYYAFEKLGQYYGIGPSLVIIYALTNFAGQAAALVMSIDA
PLKLLLSEADAKYVPNFLRKINDKKVPVGGYKLTTILVSILIIIPALGIGNSNELYNWLLDLNSIVMPMRYMWVFAAYFA
LKHYLNEKQGVEYKFTKSKSFGKIISGWCFAFTAFACILGMIPKEGEPFTSQWNFKLILNILTPVVLLGLGLILPSIARK
EQAKNN

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=474, Percent_Identity=56.1181434599156, Blast_Score=552, Evalue=1e-158,
Organism=Escherichia coli, GI48994921, Length=403, Percent_Identity=23.8213399503722, Blast_Score=126, Evalue=4e-30,
Organism=Escherichia coli, GI87082380, Length=430, Percent_Identity=21.3953488372093, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 53703; Mature: 53703

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDVLIDDQKKKSLTVTNLIWMGFTVVWGFGNVVNNYANQGLAVITSWIFIMALYFIPY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SLMVGELGSTFKEGQSGLSYWIKQTMGPLLAYLSGWTYWVVHIPYLAQKPQNLMVAGSWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCEEEEECCH
IFRNPKMVKSLNPIVLQTLVLIIFLLFVLLAANGIKSIKVLGSIAGTASFVMGILFILLM
HHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAPALRGVEVASPNMTSIKTYLPNFNLHYLTTISMLVFAVGGCEKISPYVNDTQDAGKN
HHCCHHCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHCCC
FPKAMIIMALMVTVSAILGSVAMGMMFDTTNVANDLKMNGAYYAFEKLGQYYGIGPSLVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
IYALTNFAGQAAALVMSIDAPLKLLLSEADAKYVPNFLRKINDKKVPVGGYKLTTILVSI
HHHHHHCCCHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LIIIPALGIGNSNELYNWLLDLNSIVMPMRYMWVFAAYFALKHYLNEKQGVEYKFTKSKS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
FGKIISGWCFAFTAFACILGMIPKEGEPFTSQWNFKLILNILTPVVLLGLGLILPSIARK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKNN
HHCCCC
>Mature Secondary Structure
MKNDVLIDDQKKKSLTVTNLIWMGFTVVWGFGNVVNNYANQGLAVITSWIFIMALYFIPY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SLMVGELGSTFKEGQSGLSYWIKQTMGPLLAYLSGWTYWVVHIPYLAQKPQNLMVAGSWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCEEEEECCH
IFRNPKMVKSLNPIVLQTLVLIIFLLFVLLAANGIKSIKVLGSIAGTASFVMGILFILLM
HHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAPALRGVEVASPNMTSIKTYLPNFNLHYLTTISMLVFAVGGCEKISPYVNDTQDAGKN
HHCCHHCCCEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHCCC
FPKAMIIMALMVTVSAILGSVAMGMMFDTTNVANDLKMNGAYYAFEKLGQYYGIGPSLVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
IYALTNFAGQAAALVMSIDAPLKLLLSEADAKYVPNFLRKINDKKVPVGGYKLTTILVSI
HHHHHHCCCHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
LIIIPALGIGNSNELYNWLLDLNSIVMPMRYMWVFAAYFALKHYLNEKQGVEYKFTKSKS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
FGKIISGWCFAFTAFACILGMIPKEGEPFTSQWNFKLILNILTPVVLLGLGLILPSIARK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKNN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]