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The map label for this gene is rnfB [H]

Identifier: 169824048

GI number: 169824048

Start: 406027

End: 406878

Strand: Direct

Name: rnfB [H]

Synonym: FMG_0351

Alternate gene names: 169824048

Gene position: 406027-406878 (Clockwise)

Preceding gene: 169824047

Following gene: 169824049

Centisome position: 22.59

GC content: 37.21

Gene sequence:

>852_bases
ATGACAATTTTAACTCCATTTATAATCTTGGGAGCACTAGGAATTTTATTTGCATTGCTTTTGGGTTTTGCATCTAAAAA
ATTCGAAGTTCAAGTTGATAGAAGAGTACTTAAAGTAAGAGAAATGTTACCTGGCGCAAACTGTGGTGCCTGTGGATTTC
CAGGTTGCGATGGACTTGCAGATGCCATCGTAAACAAAGGAGCACCTTGTAATTCTTGTCCAGTTGGTGGAAAAGAAACT
GCCGAAAAACTAGCAGCATTCATGGGAGCTGACGCAGTGGATTCTGCAAAGCAAGTTGCATGTGTAATGTGCCAAGGAAC
TCCAGAATACGCTACTGAAAAATTCAAATACAAAGGTATTATGGATTGTAGAGTTAACCACAATCTTCAAGGTGGAAGCA
AAACTTGTCCAGACGGATGTTTGGGTTGCGGAACTTGTGTAGATGTGTGTGACTTCGATGCGATTCACATTGTAAATGGC
ATTGCATTAGTAGACAAAGAAAAATGTACATCTTGTAAAAAATGTATTGAAATTTGTCCAAGAAATATTATTAAACTTGT
TGACTATGATCAAGACGTTTATGTAAGATGTAACAGTCACGATAAAGGTAAAGATGTAAGACAATACTGTAAAGTTGGAT
GTATTGCTTGTGGAATTTGCGCTAAGATGTGTCCAGATGGATTCAGCGTTGAAGATAACTTAGCTCACTTCAACAATGCT
GAAGGATTAGATCCAGAACAAGTTCAAAAAGCAGTAGACAAATGTCCTACAAAAGCTATTTATCCAGGACTAAAAATAAA
AGAAGAACAAGCTAAAGCAAAAGCTCAAGAAGCTGCTGTTAAAGAAGCTTAA

Upstream 100 bases:

>100_bases
ATTCCTGAAAGTTTTAAAGGTGTACCAATCGCATTTATTACTATTGGATTAATGGCGATGACATTCTTCGGATTCGGCGG
ATTGGTATAGGAGGTAATAA

Downstream 100 bases:

>100_bases
TATTTTACAGACCGTAAATTTTACGGTCTGTTTTTTTGAGATTAATTATTATAAATTTAACGAATAAAAATAACGCAACA
ATGAAATTGAAAATAAAATT

Product: electron transport complex protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTILTPFIILGALGILFALLLGFASKKFEVQVDRRVLKVREMLPGANCGACGFPGCDGLADAIVNKGAPCNSCPVGGKET
AEKLAAFMGADAVDSAKQVACVMCQGTPEYATEKFKYKGIMDCRVNHNLQGGSKTCPDGCLGCGTCVDVCDFDAIHIVNG
IALVDKEKCTSCKKCIEICPRNIIKLVDYDQDVYVRCNSHDKGKDVRQYCKVGCIACGICAKMCPDGFSVEDNLAHFNNA
EGLDPEQVQKAVDKCPTKAIYPGLKIKEEQAKAKAQEAAVKEA

Sequences:

>Translated_283_residues
MTILTPFIILGALGILFALLLGFASKKFEVQVDRRVLKVREMLPGANCGACGFPGCDGLADAIVNKGAPCNSCPVGGKET
AEKLAAFMGADAVDSAKQVACVMCQGTPEYATEKFKYKGIMDCRVNHNLQGGSKTCPDGCLGCGTCVDVCDFDAIHIVNG
IALVDKEKCTSCKKCIEICPRNIIKLVDYDQDVYVRCNSHDKGKDVRQYCKVGCIACGICAKMCPDGFSVEDNLAHFNNA
EGLDPEQVQKAVDKCPTKAIYPGLKIKEEQAKAKAQEAAVKEA
>Mature_282_residues
TILTPFIILGALGILFALLLGFASKKFEVQVDRRVLKVREMLPGANCGACGFPGCDGLADAIVNKGAPCNSCPVGGKETA
EKLAAFMGADAVDSAKQVACVMCQGTPEYATEKFKYKGIMDCRVNHNLQGGSKTCPDGCLGCGTCVDVCDFDAIHIVNGI
ALVDKEKCTSCKKCIEICPRNIIKLVDYDQDVYVRCNSHDKGKDVRQYCKVGCIACGICAKMCPDGFSVEDNLAHFNNAE
GLDPEQVQKAVDKCPTKAIYPGLKIKEEQAKAKAQEAAVKEA

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG2878

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfB

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787915, Length=177, Percent_Identity=30.5084745762712, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR010207
- InterPro:   IPR016463
- InterPro:   IPR007202 [H]

Pfam domain/function: PF00037 Fer4; PF04060 FeS [H]

EC number: NA

Molecular weight: Translated: 30278; Mature: 30147

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILTPFIILGALGILFALLLGFASKKFEVQVDRRVLKVREMLPGANCGACGFPGCDGLA
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
DAIVNKGAPCNSCPVGGKETAEKLAAFMGADAVDSAKQVACVMCQGTPEYATEKFKYKGI
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHHHHHHHCCC
MDCRVNHNLQGGSKTCPDGCLGCGTCVDVCDFDAIHIVNGIALVDKEKCTSCKKCIEICP
EEEEECCCCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHCHHEECHHHHHHHHHHHHHCC
RNIIKLVDYDQDVYVRCNSHDKGKDVRQYCKVGCIACGICAKMCPDGFSVEDNLAHFNNA
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC
EGLDPEQVQKAVDKCPTKAIYPGLKIKEEQAKAKAQEAAVKEA
CCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TILTPFIILGALGILFALLLGFASKKFEVQVDRRVLKVREMLPGANCGACGFPGCDGLA
CHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
DAIVNKGAPCNSCPVGGKETAEKLAAFMGADAVDSAKQVACVMCQGTPEYATEKFKYKGI
HHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHHHHHHHCCC
MDCRVNHNLQGGSKTCPDGCLGCGTCVDVCDFDAIHIVNGIALVDKEKCTSCKKCIEICP
EEEEECCCCCCCCCCCCCHHCCHHHHHHHHCCCHHHHHHCHHEECHHHHHHHHHHHHHCC
RNIIKLVDYDQDVYVRCNSHDKGKDVRQYCKVGCIACGICAKMCPDGFSVEDNLAHFNNA
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCC
EGLDPEQVQKAVDKCPTKAIYPGLKIKEEQAKAKAQEAAVKEA
CCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA