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The map label for this gene is mmpS4 [H]

Identifier: 169629658

GI number: 169629658

Start: 2616399

End: 2616803

Strand: Reverse

Name: mmpS4 [H]

Synonym: MAB_2572c

Alternate gene names: 169629658

Gene position: 2616803-2616399 (Counterclockwise)

Preceding gene: 169629659

Following gene: 169629657

Centisome position: 51.64

GC content: 60.74

Gene sequence:

>405_bases
ATGCCCCTGGTGGCGCTGATCGTCATCGCGGTCGTGGGTTTCGGGGTCAACCGGATTCGGGAGAAGTCGCAGGCCATAAG
CCATCCGCCGACGACGCGTCCGATTCCGGCCACAGTTGTCCAGATCAATCCCAAGAACGTCACCTATGAGGTGTTCGGCA
ATCTGGGAACCAGCGGGAAAGTGTCCTATGCCAATCTCAATAGCGAACCCGTCGATGTCGTGCTGACATCATTGCCGTGG
TCGGTTTCTGAAACCACCACGTCGTCCGCGGTGTCGCTGAGCCTGGTCGCACAGGTGGACGGCGACTCGTTGGGATGCCG
TATCCGGGTCAATGGCGAGGTTCGTGAGGAACAGGTCGTCAACCACACCGGCGCCGCGGTCGCATGCACGGTGACGGCAG
CATGA

Upstream 100 bases:

>100_bases
TACCGGGAGACCCCATGAAACACCGCACCGAAAGGTCTCGGTTATGAGTCGACGCAAACAACCAAGAGGGCAAGCCGGCC
GAATTCTGGGCGCGTTGTGG

Downstream 100 bases:

>100_bases
CCTCGGGCCAGCAGCCGCCGCTGCCCGGTGACGATGCCGACACGGGACCGGTTCCGGTGCCGACCCAACGCGCGATGAGG
CACGAAACGCACAAACATCC

Product: putative membrane protein, MmpS

Products: NA

Alternate protein names: PGB14T-X [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPLVALIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGKVSYANLNSEPVDVVLTSLPW
SVSETTTSSAVSLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA

Sequences:

>Translated_134_residues
MPLVALIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGKVSYANLNSEPVDVVLTSLPW
SVSETTTSSAVSLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA
>Mature_133_residues
PLVALIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGKVSYANLNSEPVDVVLTSLPWS
VSETTTSSAVSLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 14012; Mature: 13881

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVALIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGK
CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCE
VSYANLNSEPVDVVLTSLPWSVSETTTSSAVSLSLVAQVDGDSLGCRIRVNGEVREEQVV
EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHH
NHTGAAVACTVTAA
CCCCCEEEEEEEEC
>Mature Secondary Structure 
PLVALIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGK
CHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCE
VSYANLNSEPVDVVLTSLPWSVSETTTSSAVSLSLVAQVDGDSLGCRIRVNGEVREEQVV
EEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHH
NHTGAAVACTVTAA
CCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]