| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629620
Identifier: 169629620
GI number: 169629620
Start: 2580961
End: 2581656
Strand: Reverse
Name: 169629620
Synonym: MAB_2534c
Alternate gene names: NA
Gene position: 2581656-2580961 (Counterclockwise)
Preceding gene: 169629623
Following gene: 169629617
Centisome position: 50.95
GC content: 63.36
Gene sequence:
>696_bases GTGACCGATGAGGCGGCTGCCGGAGCGTTCAGCGCGAAAATCGCGGACGCCGCGCGCCGCATGCAGCAGGAGCACTCCAG CGTCGAAATGACGCTCAGGTCGATCACCACCGCGGCACTCGAGACCGTGCCCGGTGTGGAGCAAGCCGGCATAACGCTGG TCACCGGGCGCTACGAAATTGAGTCGAGGGCGGCGACGTCGGAAACGCCACGCAAACTCGATGACATTCAGCAGGAGTTG CGCGAGGGCCCGTGCGTGCAGTCGGCATGGGAACACGAGACGGTGTATGCCGAAGATCTTGCCCAGACGACGCCGTGGCC GCGTTTCGCCGAGGCGGCGGTGAAGCTCGGCGTTCGGTCGATGCTGTCCTTCCAGTTGTTCACCTTCGGTGAAAACCTTG GAGCGCTTAACCTTTACGCGCAGTCGCCAGGTGCGTTCGGCGCTGACTCCTATGACGCTGGACTGGCGTTGGCCACGCAC GCCGCGATCGTGCTGGTGGCGGCGCAGCGTGAGTCGCAATGGGCCTCAGCCCTTGCGTCGCGCGACGTCATTGGTCAGGC CAAGGGAATGCTGATGGAGCGTTTCAGCATCAATGCCGCAGAAGCGTTCACCGTCATCAGGACGCTGTCACAGGATTTCA ACACCAAACTGGTGGAGATCGCGCGGGCGATCGTCGAAGACCGCCCGTTAGGCTGA
Upstream 100 bases:
>100_bases ATTAGCTGAGTGTAAGGGCTCCACTGGTAGCGGACACTACCGGAAGCTGCCCAACAGGCATTTTCGGTCGCTGTCCCACA GAAACTGGCAAGATGGCCGA
Downstream 100 bases:
>100_bases CACGCGTCTCAAACGGTCCGGCACTCTGGCTTTTTGTCGTCAAGCGGAGCCATGATGTCCTTCAGTTCGCGATCCTGTTG CGGGTGTGCGGCGAAATATG
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator Receiver/ANTAR Domain-Containing Protein; Two-Component System Response Regulator; GAF Sensor Protein; Response Regulator Receiver And ANTAR Domain Protein; ANTAR Domain Protein; GAF Domain Protein; Two-Component System Response Regulator Receiver; Response Regulator; Two Component System Response Regulator; Transcription Antitermination Regulator; Regulatory Protein; Antar Domain-Containing Protein; Antar Domain Protein; ANTAR/GAF Domain-Containing Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTDEAAAGAFSAKIADAARRMQQEHSSVEMTLRSITTAALETVPGVEQAGITLVTGRYEIESRAATSETPRKLDDIQQEL REGPCVQSAWEHETVYAEDLAQTTPWPRFAEAAVKLGVRSMLSFQLFTFGENLGALNLYAQSPGAFGADSYDAGLALATH AAIVLVAAQRESQWASALASRDVIGQAKGMLMERFSINAAEAFTVIRTLSQDFNTKLVEIARAIVEDRPLG
Sequences:
>Translated_231_residues MTDEAAAGAFSAKIADAARRMQQEHSSVEMTLRSITTAALETVPGVEQAGITLVTGRYEIESRAATSETPRKLDDIQQEL REGPCVQSAWEHETVYAEDLAQTTPWPRFAEAAVKLGVRSMLSFQLFTFGENLGALNLYAQSPGAFGADSYDAGLALATH AAIVLVAAQRESQWASALASRDVIGQAKGMLMERFSINAAEAFTVIRTLSQDFNTKLVEIARAIVEDRPLG >Mature_230_residues TDEAAAGAFSAKIADAARRMQQEHSSVEMTLRSITTAALETVPGVEQAGITLVTGRYEIESRAATSETPRKLDDIQQELR EGPCVQSAWEHETVYAEDLAQTTPWPRFAEAAVKLGVRSMLSFQLFTFGENLGALNLYAQSPGAFGADSYDAGLALATHA AIVLVAAQRESQWASALASRDVIGQAKGMLMERFSINAAEAFTVIRTLSQDFNTKLVEIARAIVEDRPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24953; Mature: 24822
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50921 ANTAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEAAAGAFSAKIADAARRMQQEHSSVEMTLRSITTAALETVPGVEQAGITLVTGRYEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEH ESRAATSETPRKLDDIQQELREGPCVQSAWEHETVYAEDLAQTTPWPRFAEAAVKLGVRS HHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH MLSFQLFTFGENLGALNLYAQSPGAFGADSYDAGLALATHAAIVLVAAQRESQWASALAS HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHH RDVIGQAKGMLMERFSINAAEAFTVIRTLSQDFNTKLVEIARAIVEDRPLG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDEAAAGAFSAKIADAARRMQQEHSSVEMTLRSITTAALETVPGVEQAGITLVTGRYEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEH ESRAATSETPRKLDDIQQELREGPCVQSAWEHETVYAEDLAQTTPWPRFAEAAVKLGVRS HHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH MLSFQLFTFGENLGALNLYAQSPGAFGADSYDAGLALATHAAIVLVAAQRESQWASALAS HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHH RDVIGQAKGMLMERFSINAAEAFTVIRTLSQDFNTKLVEIARAIVEDRPLG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA